113 related articles for article (PubMed ID: 12488002)
1. Charge-charge interactions are the primary determinants of the pK values of the ionizable groups in Ribonuclease T1.
Pace CN; Huyghues-Despointes BM; Briggs JM; Grimsley GR; Scholtz JM
Biophys Chem; 2002 Dec; 101-102():211-9. PubMed ID: 12488002
[TBL] [Abstract][Full Text] [Related]
2. Charge-charge interactions are key determinants of the pK values of ionizable groups in ribonuclease Sa (pI=3.5) and a basic variant (pI=10.2).
Laurents DV; Huyghues-Despointes BM; Bruix M; Thurlkill RL; Schell D; Newsom S; Grimsley GR; Shaw KL; Treviño S; Rico M; Briggs JM; Antosiewicz JM; Scholtz JM; Pace CN
J Mol Biol; 2003 Jan; 325(5):1077-92. PubMed ID: 12527309
[TBL] [Abstract][Full Text] [Related]
3. Hydrogen bonding markedly reduces the pK of buried carboxyl groups in proteins.
Thurlkill RL; Grimsley GR; Scholtz JM; Pace CN
J Mol Biol; 2006 Sep; 362(3):594-604. PubMed ID: 16934292
[TBL] [Abstract][Full Text] [Related]
4. Contribution of histidine residues to the conformational stability of ribonuclease T1 and mutant Glu-58----Ala.
McNutt M; Mullins LS; Raushel FM; Pace CN
Biochemistry; 1990 Aug; 29(33):7572-6. PubMed ID: 1980207
[TBL] [Abstract][Full Text] [Related]
5. Ionization properties of titratable groups in ribonuclease T1. II. Electrostatic analysis.
Koumanov A; Spitzner N; Rüterjans H; Karshikoff A
Eur Biophys J; 2001 Jul; 30(3):198-206. PubMed ID: 11508839
[TBL] [Abstract][Full Text] [Related]
6. Charge-charge interactions influence the denatured state ensemble and contribute to protein stability.
Pace CN; Alston RW; Shaw KL
Protein Sci; 2000 Jul; 9(7):1395-8. PubMed ID: 10933506
[TBL] [Abstract][Full Text] [Related]
7. Buried, charged, non-ion-paired aspartic acid 76 contributes favorably to the conformational stability of ribonuclease T1.
Giletto A; Pace CN
Biochemistry; 1999 Oct; 38(40):13379-84. PubMed ID: 10529213
[TBL] [Abstract][Full Text] [Related]
8. Asp79 makes a large, unfavorable contribution to the stability of RNase Sa.
Trevino SR; Gokulan K; Newsom S; Thurlkill RL; Shaw KL; Mitkevich VA; Makarov AA; Sacchettini JC; Scholtz JM; Pace CN
J Mol Biol; 2005 Dec; 354(4):967-78. PubMed ID: 16288913
[TBL] [Abstract][Full Text] [Related]
9. pK values of the ionizable groups of proteins.
Thurlkill RL; Grimsley GR; Scholtz JM; Pace CN
Protein Sci; 2006 May; 15(5):1214-8. PubMed ID: 16597822
[TBL] [Abstract][Full Text] [Related]
10. pKa predictions with a coupled finite difference Poisson-Boltzmann and Debye-Hückel method.
Warwicker J
Proteins; 2011 Dec; 79(12):3374-80. PubMed ID: 21661058
[TBL] [Abstract][Full Text] [Related]
11. pH-dependent pKa values in proteins--a theoretical analysis of protonation energies with practical consequences for enzymatic reactions.
Bombarda E; Ullmann GM
J Phys Chem B; 2010 Feb; 114(5):1994-2003. PubMed ID: 20088566
[TBL] [Abstract][Full Text] [Related]
12. High tolerance for ionizable residues in the hydrophobic interior of proteins.
Isom DG; Cannon BR; Castañeda CA; Robinson A; García-Moreno B
Proc Natl Acad Sci U S A; 2008 Nov; 105(46):17784-8. PubMed ID: 19004768
[TBL] [Abstract][Full Text] [Related]
13. Thermodynamic analysis of ionizable groups involved in the catalytic mechanism of human matrix metalloproteinase 7 (MMP-7).
Takeharu H; Yasukawa K; Inouye K
Biochim Biophys Acta; 2011 Dec; 1814(12):1940-6. PubMed ID: 21787888
[TBL] [Abstract][Full Text] [Related]
14. Contribution of hydrogen bonding to the conformational stability of ribonuclease T1.
Shirley BA; Stanssens P; Hahn U; Pace CN
Biochemistry; 1992 Jan; 31(3):725-32. PubMed ID: 1731929
[TBL] [Abstract][Full Text] [Related]
15. Continuum electrostatic analysis of irregular ionization and proton allocation in proteins.
Koumanov A; Rüterjans H; Karshikoff A
Proteins; 2002 Jan; 46(1):85-96. PubMed ID: 11746705
[TBL] [Abstract][Full Text] [Related]
16. Studying salt effects on protein stability using ribonuclease t1 as a model system.
Beauchamp DL; Khajehpour M
Biophys Chem; 2012 Feb; 161():29-38. PubMed ID: 22197350
[TBL] [Abstract][Full Text] [Related]
17. Thermodynamics of ribonuclease T1 denaturation.
Hu CQ; Sturtevant JM; Thomson JA; Erickson RE; Pace CN
Biochemistry; 1992 May; 31(20):4876-82. PubMed ID: 1591247
[TBL] [Abstract][Full Text] [Related]
18. A modified Poisson-Boltzmann model including charge regulation for the adsorption of ionizable polyelectrolytes to charged interfaces, applied to lysozyme adsorption on silica.
Biesheuvel PM; van der Veen M; Norde W
J Phys Chem B; 2005 Mar; 109(9):4172-80. PubMed ID: 16851479
[TBL] [Abstract][Full Text] [Related]
19. Improved pKa calculations through flexibility based sampling of a water-dominated interaction scheme.
Warwicker J
Protein Sci; 2004 Oct; 13(10):2793-805. PubMed ID: 15388865
[TBL] [Abstract][Full Text] [Related]
20. pK(A) in proteins solving the Poisson-Boltzmann equation with finite elements.
Sakalli I; Knapp EW
J Comput Chem; 2015 Nov; 36(29):2147-57. PubMed ID: 26284944
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
