BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

269 related articles for article (PubMed ID: 12524367)

  • 1. Changing effective population size and the McDonald-Kreitman test.
    Eyre-Walker A
    Genetics; 2002 Dec; 162(4):2017-24. PubMed ID: 12524367
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Changing Population Size in McDonald-Kreitman Style Analyses: Artifactual Correlations and Adaptive Evolution between Humans and Chimpanzees.
    Soni V; Moutinho AF; Eyre-Walker A
    Genome Biol Evol; 2022 Feb; 14(2):. PubMed ID: 35143656
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Codon Usage Selection Can Bias Estimation of the Fraction of Adaptive Amino Acid Fixations.
    Matsumoto T; John A; Baeza-Centurion P; Li B; Akashi H
    Mol Biol Evol; 2016 Jun; 33(6):1580-9. PubMed ID: 26873577
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome.
    Andolfatto P
    Genome Res; 2007 Dec; 17(12):1755-62. PubMed ID: 17989248
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Why time matters: codon evolution and the temporal dynamics of dN/dS.
    Mugal CF; Wolf JB; Kaj I
    Mol Biol Evol; 2014 Jan; 31(1):212-31. PubMed ID: 24129904
    [TBL] [Abstract][Full Text] [Related]  

  • 6. impMKT: the imputed McDonald and Kreitman test, a straightforward correction that significantly increases the evidence of positive selection of the McDonald and Kreitman test at the gene level.
    Murga-Moreno J; Coronado-Zamora M; Casillas S; Barbadilla A
    G3 (Bethesda); 2022 Sep; 12(10):. PubMed ID: 35976111
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale.
    Latrille T; Rodrigue N; Lartillot N
    Proc Natl Acad Sci U S A; 2023 Mar; 120(11):e2214977120. PubMed ID: 36897968
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change.
    Eyre-Walker A; Keightley PD
    Mol Biol Evol; 2009 Sep; 26(9):2097-108. PubMed ID: 19535738
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Synonymous and nonsynonymous polymorphisms versus divergences in bacterial genomes.
    Hughes AL; Friedman R; Rivailler P; French JO
    Mol Biol Evol; 2008 Oct; 25(10):2199-209. PubMed ID: 18667439
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The effects of linkage on comparative estimators of selection.
    Chan CH; Hamblin S; Tanaka MM
    BMC Evol Biol; 2013 Nov; 13():244. PubMed ID: 24199711
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The effect of variation in the effective population size on the rate of adaptive molecular evolution in eukaryotes.
    Gossmann TI; Keightley PD; Eyre-Walker A
    Genome Biol Evol; 2012; 4(5):658-67. PubMed ID: 22436998
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The McDonald-Kreitman test and slightly deleterious mutations.
    Charlesworth J; Eyre-Walker A
    Mol Biol Evol; 2008 Jun; 25(6):1007-15. PubMed ID: 18195052
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The genomic rate of adaptive amino acid substitution in Drosophila.
    Bierne N; Eyre-Walker A
    Mol Biol Evol; 2004 Jul; 21(7):1350-60. PubMed ID: 15044594
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Lineage-specific differences in the amino acid substitution process.
    Huzurbazar S; Kolesov G; Massey SE; Harris KC; Churbanov A; Liberles DA
    J Mol Biol; 2010 Mar; 396(5):1410-21. PubMed ID: 20004669
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The influence of demography and weak selection on the McDonald-Kreitman test: an empirical study in Drosophila.
    Parsch J; Zhang Z; Baines JF
    Mol Biol Evol; 2009 Mar; 26(3):691-8. PubMed ID: 19126864
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular Evolution in Large Steps-Codon Substitutions under Positive Selection.
    Chen Q; He Z; Lan A; Shen X; Wen H; Wu CI
    Mol Biol Evol; 2019 Sep; 36(9):1862-1873. PubMed ID: 31077325
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Fluctuating selection models and McDonald-Kreitman type analyses.
    Gossmann TI; Waxman D; Eyre-Walker A
    PLoS One; 2014; 9(1):e84540. PubMed ID: 24409303
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Selective pressures at a codon-level predict deleterious mutations in human disease genes.
    Arbiza L; Duchi S; Montaner D; Burguet J; Pantoja-Uceda D; Pineda-Lucena A; Dopazo J; Dopazo H
    J Mol Biol; 2006 May; 358(5):1390-404. PubMed ID: 16584746
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila.
    McVean GA; Vieira J
    Genetics; 2001 Jan; 157(1):245-57. PubMed ID: 11139506
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Site-to-site variation of synonymous substitution rates.
    Pond SK; Muse SV
    Mol Biol Evol; 2005 Dec; 22(12):2375-85. PubMed ID: 16107593
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.