190 related articles for article (PubMed ID: 12547421)
1. Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins.
Anantharaman V; Aravind L; Koonin EV
Curr Opin Chem Biol; 2003 Feb; 7(1):12-20. PubMed ID: 12547421
[TBL] [Abstract][Full Text] [Related]
2. One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions.
Nagano N; Orengo CA; Thornton JM
J Mol Biol; 2002 Aug; 321(5):741-65. PubMed ID: 12206759
[TBL] [Abstract][Full Text] [Related]
3. The emergence of catalytic and structural diversity within the beta-clip fold.
Iyer LM; Aravind L
Proteins; 2004 Jun; 55(4):977-91. PubMed ID: 15146494
[TBL] [Abstract][Full Text] [Related]
4. Divergence and convergence in enzyme evolution.
Galperin MY; Koonin EV
J Biol Chem; 2012 Jan; 287(1):21-28. PubMed ID: 22069324
[TBL] [Abstract][Full Text] [Related]
5. Evolutionary markers in the (beta/alpha)8-barrel fold.
Vega MC; Lorentzen E; Linden A; Wilmanns M
Curr Opin Chem Biol; 2003 Dec; 7(6):694-701. PubMed ID: 14644177
[TBL] [Abstract][Full Text] [Related]
6. Diversification of catalytic activities and ligand interactions in the protein fold shared by the sugar isomerases, eIF2B, DeoR transcription factors, acyl-CoA transferases and methenyltetrahydrofolate synthetase.
Anantharaman V; Aravind L
J Mol Biol; 2006 Feb; 356(3):823-42. PubMed ID: 16376935
[TBL] [Abstract][Full Text] [Related]
7. Catalysing new reactions during evolution: economy of residues and mechanism.
Bartlett GJ; Borkakoti N; Thornton JM
J Mol Biol; 2003 Aug; 331(4):829-60. PubMed ID: 12909013
[TBL] [Abstract][Full Text] [Related]
8. Understanding the importance of protein structure to nature's routes for divergent evolution in TIM barrel enzymes.
Wise EL; Rayment I
Acc Chem Res; 2004 Mar; 37(3):149-58. PubMed ID: 15023082
[TBL] [Abstract][Full Text] [Related]
9. Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases.
Iyer LM; Koonin EV; Aravind L
BMC Struct Biol; 2003 Jan; 3():1. PubMed ID: 12553882
[TBL] [Abstract][Full Text] [Related]
10. Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes.
Burroughs AM; Allen KN; Dunaway-Mariano D; Aravind L
J Mol Biol; 2006 Sep; 361(5):1003-34. PubMed ID: 16889794
[TBL] [Abstract][Full Text] [Related]
11. Evolution of enzyme superfamilies.
Glasner ME; Gerlt JA; Babbitt PC
Curr Opin Chem Biol; 2006 Oct; 10(5):492-7. PubMed ID: 16935022
[TBL] [Abstract][Full Text] [Related]
12. Evolution of function in protein superfamilies, from a structural perspective.
Todd AE; Orengo CA; Thornton JM
J Mol Biol; 2001 Apr; 307(4):1113-43. PubMed ID: 11286560
[TBL] [Abstract][Full Text] [Related]
13. Finding evolutionary relations beyond superfamilies: fold-based superfamilies.
Matsuda K; Nishioka T; Kinoshita K; Kawabata T; Go N
Protein Sci; 2003 Oct; 12(10):2239-51. PubMed ID: 14500881
[TBL] [Abstract][Full Text] [Related]
14. Evolution of protein function, from a structural perspective.
Todd AE; Orengo CA; Thornton JM
Curr Opin Chem Biol; 1999 Oct; 3(5):548-56. PubMed ID: 10508675
[TBL] [Abstract][Full Text] [Related]
15. Evolution of the protein repertoire.
Chothia C; Gough J; Vogel C; Teichmann SA
Science; 2003 Jun; 300(5626):1701-3. PubMed ID: 12805536
[TBL] [Abstract][Full Text] [Related]
16. Repurposing TRASH: emergence of the enzyme organomercurial lyase from a non-catalytic zinc finger scaffold.
Kaur G; Subramanian S
J Struct Biol; 2014 Oct; 188(1):16-21. PubMed ID: 25220669
[TBL] [Abstract][Full Text] [Related]
17. Structure-based phylogeny as a diagnostic for functional characterization of proteins with a cupin fold.
Agarwal G; Rajavel M; Gopal B; Srinivasan N
PLoS One; 2009 May; 4(5):e5736. PubMed ID: 19478949
[TBL] [Abstract][Full Text] [Related]
18. The relationship between protein structure and function: a comprehensive survey with application to the yeast genome.
Hegyi H; Gerstein M
J Mol Biol; 1999 Apr; 288(1):147-64. PubMed ID: 10329133
[TBL] [Abstract][Full Text] [Related]
19. The TIM Barrel Architecture Facilitated the Early Evolution of Protein-Mediated Metabolism.
Goldman AD; Beatty JT; Landweber LF
J Mol Evol; 2016 Jan; 82(1):17-26. PubMed ID: 26733481
[TBL] [Abstract][Full Text] [Related]
20. Catalytic and binding poly-reactivities shared by two unrelated proteins: The potential role of promiscuity in enzyme evolution.
James LC; Tawfik DS
Protein Sci; 2001 Dec; 10(12):2600-7. PubMed ID: 11714928
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]