BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

113 related articles for article (PubMed ID: 12559907)

  • 1. Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands.
    Suto RK; Edayathumangalam RS; White CL; Melander C; Gottesfeld JM; Dervan PB; Luger K
    J Mol Biol; 2003 Feb; 326(2):371-80. PubMed ID: 12559907
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sequence-dependent Kink-and-Slide deformations of nucleosomal DNA facilitated by histone arginines bound in the minor groove.
    Wang D; Ulyanov NB; Zhurkin VB
    J Biomol Struct Dyn; 2010 Jun; 27(6):843-59. PubMed ID: 20232937
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Design, synthesis, and DNA binding characteristics of a group of orthogonally positioned diamino, N-formamido, pyrrole- and imidazole-containing polyamides.
    Chavda S; Babu B; Patil P; Plaunt A; Ferguson A; Lee M; Tzou S; Sjoholm R; Rice T; Mackay H; Ramos J; Wang S; Lin S; Kiakos K; Wilson WD; Hartley JA; Lee M
    Bioorg Med Chem; 2013 Jul; 21(13):3907-18. PubMed ID: 23647824
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions.
    Muthurajan UM; Bao Y; Forsberg LJ; Edayathumangalam RS; Dyer PN; White CL; Luger K
    EMBO J; 2004 Jan; 23(2):260-71. PubMed ID: 14739929
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Asymmetric unwrapping of nucleosomes under tension directed by DNA local flexibility.
    Ngo TT; Zhang Q; Zhou R; Yodh JG; Ha T
    Cell; 2015 Mar; 160(6):1135-44. PubMed ID: 25768909
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The hybridization-stabilization assay: a solution-based isothermal method for rapid screening and determination of sequence preference of ligands that bind to duplexed nucleic acids.
    Gonzalez C; Moore M; Ribeiro S; Schmitz U; Schroth GP; Turin L; Bruice TW
    Nucleic Acids Res; 2001 Aug; 29(16):E85. PubMed ID: 11504893
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Electrostatic interactions between arginines and the minor groove in the nucleosome.
    West SM; Rohs R; Mann RS; Honig B
    J Biomol Struct Dyn; 2010 Jun; 27(6):861-6. PubMed ID: 20232938
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The HRP3 PWWP domain recognizes the minor groove of double-stranded DNA and recruits HRP3 to chromatin.
    Tian W; Yan P; Xu N; Chakravorty A; Liefke R; Xi Q; Wang Z
    Nucleic Acids Res; 2019 Jun; 47(10):5436-5448. PubMed ID: 31162607
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Biophysical analysis and small-angle X-ray scattering-derived structures of MeCP2-nucleosome complexes.
    Yang C; van der Woerd MJ; Muthurajan UM; Hansen JC; Luger K
    Nucleic Acids Res; 2011 May; 39(10):4122-35. PubMed ID: 21278419
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bend-Induced Twist Waves and the Structure of Nucleosomal DNA.
    Skoruppa E; Nomidis SK; Marko JF; Carlon E
    Phys Rev Lett; 2018 Aug; 121(8):088101. PubMed ID: 30192578
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Nucleosome dynamics between tension-induced states.
    Mollazadeh-Beidokhti L; Mohammad-Rafiee F; Schiessel H
    Biophys J; 2012 May; 102(10):2235-40. PubMed ID: 22677376
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Site-Specific Arrangement and Structure Determination of Minor Groove Binding Molecules in Self-Assembled Three-Dimensional DNA Crystals.
    Simmons CR; Buchberger A; Henry SJW; Novacek A; Fahmi NE; MacCulloch T; Stephanopoulos N; Yan H
    J Am Chem Soc; 2023 Dec; 145(48):26075-26085. PubMed ID: 37987645
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Orthogonal γPNA Dimerization Domains Empower DNA Binders with Cooperativity and Versatility Mimicking that of Transcription Factor Pairs.
    Yu Z; Hsieh WC; Asamitsu S; Hashiya K; Bando T; Ly DH; Sugiyama H
    Chemistry; 2018 Sep; 24(53):14183-14188. PubMed ID: 30003621
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
    Kobayashi W; Sappler AH; Bollschweiler D; Kümmecke M; Basquin J; Arslantas EN; Ruangroengkulrith S; Hornberger R; Duderstadt K; Tachibana K
    Nat Struct Mol Biol; 2024 May; 31(5):757-766. PubMed ID: 38409506
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Functional Disruption of the Cancer-Relevant Interaction between Survivin and Histone H3 with a Guanidiniocarbonyl Pyrrole Ligand.
    Vallet C; Aschmann D; Beuck C; Killa M; Meiners A; Mertel M; Ehlers M; Bayer P; Schmuck C; Giese M; Knauer SK
    Angew Chem Int Ed Engl; 2020 Mar; 59(14):5567-5571. PubMed ID: 31916356
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Using synthetic genome readers/regulators to interrogate chromatin processes: A brief review.
    Philips SJ; Danda A; Ansari AZ
    Methods; 2024 May; 225():20-27. PubMed ID: 38471600
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The nucleolar shell provides anchoring sites for DNA untwisting.
    Fukute J; Maki K; Adachi T
    Commun Biol; 2024 Jan; 7(1):83. PubMed ID: 38263258
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Energy-driven genome regulation by ATP-dependent chromatin remodellers.
    Eustermann S; Patel AB; Hopfner KP; He Y; Korber P
    Nat Rev Mol Cell Biol; 2024 Apr; 25(4):309-332. PubMed ID: 38081975
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Evaluation by Experimentation and Simulation of a FRET Pair Comprising Fluorescent Nucleobase Analogs in Nucleosomes.
    Hirashima S; Park S; Sugiyama H
    Chemistry; 2023 Apr; 29(24):e202203961. PubMed ID: 36700521
    [TBL] [Abstract][Full Text] [Related]  

  • 20. FACT maintains nucleosomes during transcription and stem cell viability in adult mice.
    Goswami I; Sandlesh P; Stablewski A; Toshkov I; Safina AF; Magnitov M; Wang J; Gurova K
    EMBO Rep; 2022 Apr; 23(4):e53684. PubMed ID: 35179289
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.