BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 12577265)

  • 1. A path from primary protein sequence to ligand recognition.
    Kho R; Baker BL; Newman JV; Jack RM; Sem DS; Villar HO; Hansen MR
    Proteins; 2003 Mar; 50(4):589-99. PubMed ID: 12577265
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Prediction of coenzyme specificity in dehydrogenases/reductases. A hidden Markov model-based method and its application on complete genomes.
    Kallberg Y; Persson B
    FEBS J; 2006 Mar; 273(6):1177-84. PubMed ID: 16519683
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The three-dimensional structures of the Mycobacterium tuberculosis dihydrodipicolinate reductase-NADH-2,6-PDC and -NADPH-2,6-PDC complexes. Structural and mutagenic analysis of relaxed nucleotide specificity.
    Cirilli M; Zheng R; Scapin G; Blanchard JS
    Biochemistry; 2003 Sep; 42(36):10644-50. PubMed ID: 12962488
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Structural and biochemical characterization of a novel aldehyde dehydrogenase encoded by the benzoate oxidation pathway in Burkholderia xenovorans LB400.
    Bains J; Boulanger MJ
    J Mol Biol; 2008 Jun; 379(3):597-608. PubMed ID: 18462753
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A new family of NAD(P)H-dependent oxidoreductases distinct from conventional Rossmann-fold proteins.
    Muramatsu H; Mihara H; Goto M; Miyahara I; Hirotsu K; Kurihara T; Esaki N
    J Biosci Bioeng; 2005 Jun; 99(6):541-7. PubMed ID: 16233829
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The emergence of catalytic and structural diversity within the beta-clip fold.
    Iyer LM; Aravind L
    Proteins; 2004 Jun; 55(4):977-91. PubMed ID: 15146494
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Towards a structural classification of phosphate binding sites in protein-nucleotide complexes: an automated all-against-all structural comparison using geometric matching.
    Brakoulias A; Jackson RM
    Proteins; 2004 Aug; 56(2):250-60. PubMed ID: 15211509
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structure of alanine dehydrogenase from Archaeoglobus: active site analysis and relation to bacterial cyclodeaminases and mammalian mu crystallin.
    Gallagher DT; Monbouquette HG; Schröder I; Robinson H; Holden MJ; Smith NN
    J Mol Biol; 2004 Sep; 342(1):119-30. PubMed ID: 15313611
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from Escherichia coli.
    Kim IK; Yim HS; Kim MK; Kim DW; Kim YM; Cha SS; Kang SO
    J Mol Biol; 2008 May; 379(2):372-84. PubMed ID: 18455185
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Rational proteomics I. Fingerprint identification and cofactor specificity in the short-chain oxidoreductase (SCOR) enzyme family.
    Duax WL; Pletnev V; Addlagatta A; Bruenn J; Weeks CM
    Proteins; 2003 Dec; 53(4):931-43. PubMed ID: 14635134
    [TBL] [Abstract][Full Text] [Related]  

  • 11. alpha/beta barrel evolution and the modular assembly of enzymes: emerging trends in the flavin oxidase/dehydrogenase family.
    Scrutton NS
    Bioessays; 1994 Feb; 16(2):115-22. PubMed ID: 8147842
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Crystallographic and pre-steady-state kinetics studies on binding of NADH to wild-type and isoniazid-resistant enoyl-ACP(CoA) reductase enzymes from Mycobacterium tuberculosis.
    Oliveira JS; Pereira JH; Canduri F; Rodrigues NC; de Souza ON; de Azevedo WF; Basso LA; Santos DS
    J Mol Biol; 2006 Jun; 359(3):646-66. PubMed ID: 16647717
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Molecular docking for substrate identification: the short-chain dehydrogenases/reductases.
    Favia AD; Nobeli I; Glaser F; Thornton JM
    J Mol Biol; 2008 Jan; 375(3):855-74. PubMed ID: 18036612
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Crystal structure of novel NADP-dependent 3-hydroxyisobutyrate dehydrogenase from Thermus thermophilus HB8.
    Lokanath NK; Ohshima N; Takio K; Shiromizu I; Kuroishi C; Okazaki N; Kuramitsu S; Yokoyama S; Miyano M; Kunishima N
    J Mol Biol; 2005 Sep; 352(4):905-17. PubMed ID: 16126223
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Functional analysis of the Mycobacterium tuberculosis FAD-dependent thymidylate synthase, ThyX, reveals new amino acid residues contributing to an extended ThyX motif.
    Ulmer JE; Boum Y; Thouvenel CD; Myllykallio H; Sibley CH
    J Bacteriol; 2008 Mar; 190(6):2056-64. PubMed ID: 18192395
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cell surface proteins in archaeal and bacterial genomes comprising "LVIVD", "RIVW" and "LGxL" tandem sequence repeats are predicted to fold as beta-propeller.
    Adindla S; Inampudi KK; Guruprasad L
    Int J Biol Macromol; 2007 Oct; 41(4):454-68. PubMed ID: 17681373
    [TBL] [Abstract][Full Text] [Related]  

  • 17. NADP-dependent enzymes. II: Evolution of the mono- and dinucleotide binding domains.
    Carugo O; Argos P
    Proteins; 1997 May; 28(1):29-40. PubMed ID: 9144788
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate.
    Meyer S; Scrima A; Versées W; Wittinghofer A
    J Mol Biol; 2008 Jul; 380(3):532-47. PubMed ID: 18565343
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Crystallographic studies on the binding of isonicotinyl-NAD adduct to wild-type and isoniazid resistant 2-trans-enoyl-ACP (CoA) reductase from Mycobacterium tuberculosis.
    Dias MV; Vasconcelos IB; Prado AM; Fadel V; Basso LA; de Azevedo WF; Santos DS
    J Struct Biol; 2007 Sep; 159(3):369-80. PubMed ID: 17588773
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Electron transfer in flavocytochrome P450 BM3: kinetics of flavin reduction and oxidation, the role of cysteine 999, and relationships with mammalian cytochrome P450 reductase.
    Roitel O; Scrutton NS; Munro AW
    Biochemistry; 2003 Sep; 42(36):10809-21. PubMed ID: 12962506
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.