These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

281 related articles for article (PubMed ID: 12577271)

  • 1. Thermal unfolding simulations of apo-calmodulin using leap-dynamics.
    Kleinjung J; Fraternali F; Martin SR; Bayley PM
    Proteins; 2003 Mar; 50(4):648-56. PubMed ID: 12577271
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Methods for molecular dynamics simulations of protein folding/unfolding in solution.
    Beck DA; Daggett V
    Methods; 2004 Sep; 34(1):112-20. PubMed ID: 15283920
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computer simulations of the refolding of sperm whale apomyoglobin from high-temperature denaturated state.
    Dametto M; Cárdenas AE
    J Phys Chem B; 2008 Aug; 112(31):9501-6. PubMed ID: 18616314
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Is protein unfolding the reverse of protein folding? A lattice simulation analysis.
    Dinner AR; Karplus M
    J Mol Biol; 1999 Sep; 292(2):403-19. PubMed ID: 10493884
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations.
    Paci E; Karplus M
    J Mol Biol; 1999 May; 288(3):441-59. PubMed ID: 10329153
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Structural and dynamic effects of alpha-helix deletion in Sso7d: implications for protein thermal stability.
    Merlino A; Graziano G; Mazzarella L
    Proteins; 2004 Dec; 57(4):692-701. PubMed ID: 15317021
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Retardation of the unfolding process by single N-glycosylation of ribonuclease A based on molecular dynamics simulations.
    Choi Y; Lee JH; Hwang S; Kim JK; Jeong K; Jung S
    Biopolymers; 2008 Feb; 89(2):114-23. PubMed ID: 17937402
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Thermal unfolding of Apo and Holo Desulfovibrio desulfuricans flavodoxin: cofactor stabilizes folded and intermediate states.
    Muralidhara BK; Wittung-Stafshede P
    Biochemistry; 2004 Oct; 43(40):12855-64. PubMed ID: 15461458
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin.
    Lazaridis T; Lee I; Karplus M
    Protein Sci; 1997 Dec; 6(12):2589-605. PubMed ID: 9416608
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural stabilization of a rigid beta-sheet cluster of fucosylated proteinase inhibitor PMPC (Pars intercerebralis major peptide C) against thermal denaturation: An unfolding molecular dynamics simulation study.
    Choi Y; Kim H; Lee JH; Park S; Jeong K; Jung S
    J Mol Graph Model; 2010 Feb; 28(6):487-94. PubMed ID: 20053575
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Insight into ribonuclease A domain swapping by molecular dynamics unfolding simulations.
    Esposito L; Daggett V
    Biochemistry; 2005 Mar; 44(9):3358-68. PubMed ID: 15736946
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop.
    Sorin EJ; Engelhardt MA; Herschlag D; Pande VS
    J Mol Biol; 2002 Apr; 317(4):493-506. PubMed ID: 11955005
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA; Mehler EL; Zhang D; Weinstein H
    Proteins; 2003 Apr; 51(1):109-25. PubMed ID: 12596268
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Coupling between hydration layer dynamics and unfolding kinetics of HP-36.
    Bandyopadhyay S; Chakraborty S; Bagchi B
    J Chem Phys; 2006 Aug; 125(8):084912. PubMed ID: 16965062
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A detailed unfolding pathway of a (beta/alpha)8-barrel protein as studied by molecular dynamics simulations.
    Akanuma S; Miyagawa H; Kitamura K; Yamagishi A
    Proteins; 2005 Feb; 58(3):538-46. PubMed ID: 15614829
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Temperature dependence of the free energy landscape of the src-SH3 protein domain.
    Guo W; Lampoudi S; Shea JE
    Proteins; 2004 May; 55(2):395-406. PubMed ID: 15048830
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Replica exchange simulation of reversible folding/unfolding of the Trp-cage miniprotein in explicit solvent: on the structure and possible role of internal water.
    Paschek D; Nymeyer H; García AE
    J Struct Biol; 2007 Mar; 157(3):524-33. PubMed ID: 17293125
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Calculation of protein heat capacity from replica-exchange molecular dynamics simulations with different implicit solvent models.
    Yeh IC; Lee MS; Olson MA
    J Phys Chem B; 2008 Nov; 112(47):15064-73. PubMed ID: 18959439
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular dynamics simulation of thermal unfolding of Thermatoga maritima DHFR.
    Pang J; Allemann RK
    Phys Chem Chem Phys; 2007 Feb; 9(6):711-8. PubMed ID: 17268682
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Thermal unfolding simulations of a multimeric protein--transition state and unfolding pathways.
    Duan J; Nilsson L
    Proteins; 2005 May; 59(2):170-82. PubMed ID: 15723359
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.