These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

120 related articles for article (PubMed ID: 12584119)

  • 1. 'Hybrid protein model' for optimally defining 3D protein structure fragments.
    de Brevern AG; Hazout S
    Bioinformatics; 2003 Feb; 19(3):345-53. PubMed ID: 12584119
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Detecting protein candidate fragments using a structural alphabet profile comparison approach.
    Shen Y; Picord G; Guyon F; Tuffery P
    PLoS One; 2013; 8(11):e80493. PubMed ID: 24303019
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Hierarchical protein folding pathways: a computational study of protein fragments.
    Haspel N; Tsai CJ; Wolfson H; Nussinov R
    Proteins; 2003 May; 51(2):203-15. PubMed ID: 12660989
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A reduced amino acid alphabet for understanding and designing protein adaptation to mutation.
    Etchebest C; Benros C; Bornot A; Camproux AC; de Brevern AG
    Eur Biophys J; 2007 Nov; 36(8):1059-69. PubMed ID: 17565494
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Extension of a local backbone description using a structural alphabet: a new approach to the sequence-structure relationship.
    de Brevern AG; ValadiƩ H; Hazout S; Etchebest C
    Protein Sci; 2002 Dec; 11(12):2871-86. PubMed ID: 12441385
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A protein block based fold recognition method for the annotation of twilight zone sequences.
    Suresh V; Ganesan K; Parthasarathy S
    Protein Pept Lett; 2013 Mar; 20(3):249-54. PubMed ID: 22591480
    [TBL] [Abstract][Full Text] [Related]  

  • 7. 'Protein Peeling': an approach for splitting a 3D protein structure into compact fragments.
    Gelly JC; de Brevern AG; Hazout S
    Bioinformatics; 2006 Jan; 22(2):129-33. PubMed ID: 16301202
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Assessing a novel approach for predicting local 3D protein structures from sequence.
    Benros C; de Brevern AG; Etchebest C; Hazout S
    Proteins; 2006 Mar; 62(4):865-80. PubMed ID: 16385557
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A structural alphabet for local protein structures: improved prediction methods.
    Etchebest C; Benros C; Hazout S; de Brevern AG
    Proteins; 2005 Jun; 59(4):810-27. PubMed ID: 15822101
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Improvement of protein structure comparison using a structural alphabet.
    Joseph AP; Srinivasan N; de Brevern AG
    Biochimie; 2011 Sep; 93(9):1434-45. PubMed ID: 21569819
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Reducing the computational complexity of protein folding via fragment folding and assembly.
    Haspel N; Tsai CJ; Wolfson H; Nussinov R
    Protein Sci; 2003 Jun; 12(6):1177-87. PubMed ID: 12761388
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A "FRankenstein's monster" approach to comparative modeling: merging the finest fragments of Fold-Recognition models and iterative model refinement aided by 3D structure evaluation.
    Kosinski J; Cymerman IA; Feder M; Kurowski MA; Sasin JM; Bujnicki JM
    Proteins; 2003; 53 Suppl 6():369-79. PubMed ID: 14579325
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Less is more: towards an optimal universal description of protein folds.
    Szustakowski JD; Kasif S; Weng Z
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii66-71. PubMed ID: 16204127
    [TBL] [Abstract][Full Text] [Related]  

  • 14. HYPROSP II--a knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence.
    Lin HN; Chang JM; Wu KP; Sung TY; Hsu WL
    Bioinformatics; 2005 Aug; 21(15):3227-33. PubMed ID: 15932901
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Improving protein fold recognition with hybrid profiles combining sequence and structure evolution.
    Ghouzam Y; Postic G; de Brevern AG; Gelly JC
    Bioinformatics; 2015 Dec; 31(23):3782-9. PubMed ID: 26254434
    [TBL] [Abstract][Full Text] [Related]  

  • 16. "Pinning strategy": a novel approach for predicting the backbone structure in terms of protein blocks from sequence.
    De Brevern AG; Etchebest C; Benros C; Hazout S
    J Biosci; 2007 Jan; 32(1):51-70. PubMed ID: 17426380
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Prediction of protein local structures and folding fragments based on building-block library.
    Dong Q; Wang X; Lin L
    Proteins; 2008 Jul; 72(1):353-66. PubMed ID: 18214964
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Toward optimal fragment generations for ab initio protein structure assembly.
    Xu D; Zhang Y
    Proteins; 2013 Feb; 81(2):229-39. PubMed ID: 22972754
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Building blocks, hinge-bending motions and protein topology.
    Sinha N; Tsa CJ; Nussinov R
    J Biomol Struct Dyn; 2001 Dec; 19(3):369-80. PubMed ID: 11790137
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Local structure-based sequence profile database for local and global protein structure predictions.
    Yang AS; Wang LY
    Bioinformatics; 2002 Dec; 18(12):1650-7. PubMed ID: 12490450
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.