These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Simplicial neighborhood analysis of protein packing (SNAPP): a computational geometry approach to studying proteins. Tropsha A; Carter CW; Cammer S; Vaisman II Methods Enzymol; 2003; 374():509-44. PubMed ID: 14696387 [No Abstract] [Full Text] [Related]
3. Computational design of proteins stereochemically optimized in size, stability, and folding speed. Joshi S; Rana S; Wangikar P; Durani S Biopolymers; 2006 Oct; 83(2):122-34. PubMed ID: 16683262 [TBL] [Abstract][Full Text] [Related]
4. Structural biology: form and function instructions. Kelly JW Nature; 2005 Sep; 437(7058):486-7. PubMed ID: 16177774 [No Abstract] [Full Text] [Related]
5. Folding a de novo designed peptide into an alpha-helix through hydrophobic binding by a bowl-shaped host. Tashiro S; Tominaga M; Yamaguchi Y; Kato K; Fujita M Angew Chem Int Ed Engl; 2005 Dec; 45(2):241-4. PubMed ID: 16312001 [No Abstract] [Full Text] [Related]
6. Inferring protein function from structure. Bartlett GJ; Todd AE; Thornton JM Methods Biochem Anal; 2003; 44():387-407. PubMed ID: 12647396 [No Abstract] [Full Text] [Related]
7. Incremental contribution to protein stability from a beta hairpin "finger": limits on the stability of designed beta hairpin peptides. Searle MS; Platt GW; Bofill R; Simpson SA; Ciani B Angew Chem Int Ed Engl; 2004 Apr; 43(15):1991-4. PubMed ID: 15065282 [No Abstract] [Full Text] [Related]
8. Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment. Ginalski K; Rychlewski L Proteins; 2003; 53 Suppl 6():410-7. PubMed ID: 14579329 [TBL] [Abstract][Full Text] [Related]
9. Direct correlation between proteins' folding rates and their amino acid compositions: an ab initio folding rate prediction. Ma BG; Guo JX; Zhang HY Proteins; 2006 Nov; 65(2):362-72. PubMed ID: 16937389 [TBL] [Abstract][Full Text] [Related]
10. Selective targeting of indel-inferred differences in spatial structures of highly homologous proteins. Cherkasov A; Nandan D; Reiner NE Proteins; 2005 Mar; 58(4):950-4. PubMed ID: 15657927 [TBL] [Abstract][Full Text] [Related]
11. New method for protein secondary structure assignment based on a simple topological descriptor. Taylor T; Rivera M; Wilson G; Vaisman II Proteins; 2005 Aug; 60(3):513-24. PubMed ID: 15887224 [TBL] [Abstract][Full Text] [Related]
12. Computational approach to the protein-folding problem. Banavar JR; Maritan A Proteins; 2001 Mar; 42(4):433-5. PubMed ID: 11170197 [No Abstract] [Full Text] [Related]
14. Are denatured proteins ever random coils? Baldwin RL; Zimm BH Proc Natl Acad Sci U S A; 2000 Nov; 97(23):12391-2. PubMed ID: 11070072 [No Abstract] [Full Text] [Related]
15. Structure-based design of peptides that self-assemble into regular polyhedral nanoparticles. Raman S; Machaidze G; Lustig A; Aebi U; Burkhard P Nanomedicine; 2006 Jun; 2(2):95-102. PubMed ID: 17292121 [TBL] [Abstract][Full Text] [Related]
16. Artificial protein sensors. Schrader T; Koch S Mol Biosyst; 2007 Apr; 3(4):241-8. PubMed ID: 17372652 [TBL] [Abstract][Full Text] [Related]
17. Evolved cellular automata for protein secondary structure prediction imitate the determinants for folding observed in nature. Chopra P; Bender A In Silico Biol; 2007; 7(1):87-93. PubMed ID: 17688429 [TBL] [Abstract][Full Text] [Related]
18. PFRES: protein fold classification by using evolutionary information and predicted secondary structure. Chen K; Kurgan L Bioinformatics; 2007 Nov; 23(21):2843-50. PubMed ID: 17942446 [TBL] [Abstract][Full Text] [Related]
19. Protein conformational transitions coupled to binding in molecular recognition of unstructured proteins: deciphering the effect of intermolecular interactions on computational structure prediction of the p27Kip1 protein bound to the cyclin A-cyclin-dependent kinase 2 complex. Verkhivker GM Proteins; 2005 Feb; 58(3):706-16. PubMed ID: 15609350 [TBL] [Abstract][Full Text] [Related]
20. Prediction of protein-protein interactions from evolutionary information. Valencia A; Pazos F Methods Biochem Anal; 2003; 44():411-26. PubMed ID: 12647397 [No Abstract] [Full Text] [Related] [Next] [New Search]