These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

98 related articles for article (PubMed ID: 12675497)

  • 1. Computational screening of branched cyclic peptide motifs as potential enzyme mimetics.
    Stavrakoudis A; Makropoulou S; Tsikaris V; Sakarellos-Daitsiotis M; Sakarellos C; Demetropoulos IN
    J Pept Sci; 2003 Mar; 9(3):145-55. PubMed ID: 12675497
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Probing the Ser-Ser-Lys catalytic triad mechanism of peptide amidase: computational studies of the ground state, transition state, and intermediate.
    Valiña AL; Mazumder-Shivakumar D; Bruice TC
    Biochemistry; 2004 Dec; 43(50):15657-72. PubMed ID: 15595822
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Design, synthesis and pharmacological evaluation of cyclic mimetics of the insulin-like peptide 3 (INSL3) B-chain.
    Shabanpoor F; Bathgate RA; Hossain MA; Giannakis E; Wade JD; Hughes RA
    J Pept Sci; 2007 Feb; 13(2):113-20. PubMed ID: 17120268
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Reversible scaling of dihedral angle barriers during molecular dynamics to improve structure prediction of cyclic peptides.
    Riemann RN; Zacharias M
    J Pept Res; 2004 Apr; 63(4):354-64. PubMed ID: 15102053
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Molecular Dynamics as a pattern recognition tool: an automated process detects peptides that preserve the 3D arrangement of Trypsin's Active Site.
    Tatsis VA; Stavrakoudis A; Demetropoulos IN
    Biophys Chem; 2008 Mar; 133(1-3):36-44. PubMed ID: 18177993
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Conformational analysis of furanoid epsilon-sugar amino acid containing cyclic peptides by NMR spectroscopy, molecular dynamics simulation, and X-ray crystallography: evidence for a novel turn structure.
    van Well RM; Marinelli L; Altona C; Erkelens K; Siegal G; van Raaij M; Llamas-Saiz AL; Kessler H; Novellino E; Lavecchia A; van Boom JH; Overhand M
    J Am Chem Soc; 2003 Sep; 125(36):10822-9. PubMed ID: 12952461
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NMR solution structure of a potent cyclic nonapeptide inhibitor of ICAM-1-mediated leukocyte adhesion produced by homologous amino acid substitution.
    Sillerud LO; Burks EJ; Brown WM; Brown DC; Larson RS
    J Pept Res; 2004 Oct; 64(4):127-40. PubMed ID: 15357668
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Predicting the conformational states of cyclic tetrapeptides.
    Loiseau N; Gomis JM; Santolini J; Delaforge M; André F
    Biopolymers; 2003 Jul; 69(3):363-85. PubMed ID: 12833263
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Beta2-amino acids in the design of conformationally homogeneous cyclo-peptide scaffolds.
    Norgren AS; Büttner F; Prabpai S; Kongsaeree P; Arvidsson PI
    J Org Chem; 2006 Sep; 71(18):6814-21. PubMed ID: 16930031
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization of the conformational behavior of peptide Contryphan Vn: a theoretical study.
    D'Alessandro M; Paci M; Amadei A
    Biopolymers; 2004 Aug; 74(6):448-56. PubMed ID: 15274088
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 A resolution: dynamics of catalytic residues.
    Oakley AJ; Klvana M; Otyepka M; Nagata Y; Wilce MC; Damborský J
    Biochemistry; 2004 Feb; 43(4):870-8. PubMed ID: 14744129
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Computer simulations of the flexibility of a series of synthetic cyclic peptide analogues.
    Thomas A; Roux B; Smith JC
    Biopolymers; 1993 Aug; 33(8):1249-70. PubMed ID: 8364158
    [TBL] [Abstract][Full Text] [Related]  

  • 13. c[D-pro-Pro-D-pro-N-methyl-Ala] adopts a rigid conformation that serves as a scaffold to mimic reverse-turns.
    Arbor S; Kao J; Wu Y; Marshall GR
    Biopolymers; 2008; 90(3):384-93. PubMed ID: 17941003
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Conformational interconversion in compstatin probed with molecular dynamics simulations.
    Mallik B; Lambris JD; Morikis D
    Proteins; 2003 Oct; 53(1):130-41. PubMed ID: 12945056
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Structure-activity relationships of de novo designed cyclic antimicrobial peptides based on gramicidin S.
    Lee DL; Hodges RS
    Biopolymers; 2003; 71(1):28-48. PubMed ID: 12712499
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Structure, dynamics and solvation of HIV-1 protease/saquinavir complex in aqueous solution and their contributions to drug resistance: molecular dynamic simulations.
    Wittayanarakul K; Aruksakunwong O; Sompornpisut P; Sanghiran-Lee V; Parasuk V; Pinitglang S; Hannongbua S
    J Chem Inf Model; 2005; 45(2):300-8. PubMed ID: 15807491
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conformational and biochemical analysis of the cyclic peptides which modulate serine protease activity.
    Pakkala M; Jylhäsalmi A; Wu P; Leinonen J; Stenman UH; Santa H; Vepsäläinen J; Peräkylä M; Närvänen A
    J Pept Sci; 2004 Jul; 10(7):439-47. PubMed ID: 15298179
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A theoretical study of pentacyclo-undecane cage peptides of the type [Ac-X-Y-NHMe].
    Bisetty K; Corcho FJ; Canto J; Kruger HG; Perez JJ
    J Pept Sci; 2006 Feb; 12(2):92-105. PubMed ID: 15952237
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Vibrational circular dichroism and IR spectral analysis as a test of theoretical conformational modeling for a cyclic hexapeptide.
    Bour P; Kim J; Kapitan J; Hammer RP; Huang R; Wu L; Keiderling TA
    Chirality; 2008 Nov; 20(10):1104-19. PubMed ID: 18506832
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Redesign of catalytic center of an enzyme: aspartic to serine proteinase.
    Tanaka T; Yada RY
    Biochem Biophys Res Commun; 2004 Oct; 323(3):947-53. PubMed ID: 15381092
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.