These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

159 related articles for article (PubMed ID: 12782323)

  • 1. Predicted protein-protein interaction sites from local sequence information.
    Ofran Y; Rost B
    FEBS Lett; 2003 Jun; 544(1-3):236-9. PubMed ID: 12782323
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Prediction of protein-protein interaction sites using support vector machines.
    Koike A; Takagi T
    Protein Eng Des Sel; 2004 Feb; 17(2):165-73. PubMed ID: 15047913
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction of protein interaction sites from sequence profile and residue neighbor list.
    Zhou HX; Shan Y
    Proteins; 2001 Aug; 44(3):336-43. PubMed ID: 11455607
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Protein Residue Contacts and Prediction Methods.
    Adhikari B; Cheng J
    Methods Mol Biol; 2016; 1415():463-76. PubMed ID: 27115648
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PSSM-based prediction of DNA binding sites in proteins.
    Ahmad S; Sarai A
    BMC Bioinformatics; 2005 Feb; 6():33. PubMed ID: 15720719
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model.
    Wang S; Sun S; Li Z; Zhang R; Xu J
    PLoS Comput Biol; 2017 Jan; 13(1):e1005324. PubMed ID: 28056090
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Sequence and structural features of carbohydrate binding in proteins and assessment of predictability using a neural network.
    Malik A; Ahmad S
    BMC Struct Biol; 2007 Jan; 7():1. PubMed ID: 17201922
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Radial basis function neural network ensemble for predicting protein-protein interaction sites in heterocomplexes.
    Wang B; Chen P; Wang P; Zhao G; Zhang X
    Protein Pept Lett; 2010 Sep; 17(9):1111-6. PubMed ID: 20509853
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Prediction of protein-protein interactions: unifying evolution and structure at protein interfaces.
    Tuncbag N; Gursoy A; Keskin O
    Phys Biol; 2011 Jun; 8(3):035006. PubMed ID: 21572173
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sequence-based prediction of protein interaction sites with an integrative method.
    Chen XW; Jeong JC
    Bioinformatics; 2009 Mar; 25(5):585-91. PubMed ID: 19153136
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Partner-aware prediction of interacting residues in protein-protein complexes from sequence data.
    Ahmad S; Mizuguchi K
    PLoS One; 2011; 6(12):e29104. PubMed ID: 22194998
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Using a neural network and spatial clustering to predict the location of active sites in enzymes.
    Gutteridge A; Bartlett GJ; Thornton JM
    J Mol Biol; 2003 Jul; 330(4):719-34. PubMed ID: 12850142
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Assessment of intramolecular contact predictions for CASP7.
    Izarzugaza JM; GraƱa O; Tress ML; Valencia A; Clarke ND
    Proteins; 2007; 69 Suppl 8():152-8. PubMed ID: 17671976
    [TBL] [Abstract][Full Text] [Related]  

  • 14. BindML/BindML+: Detecting Protein-Protein Interaction Interface Propensity from Amino Acid Substitution Patterns.
    Wei Q; La D; Kihara D
    Methods Mol Biol; 2017; 1529():279-289. PubMed ID: 27914057
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identifying protein-protein interfacial residues in heterocomplexes using residue conservation scores.
    Li JJ; Huang DS; Wang B; Chen P
    Int J Biol Macromol; 2006 May; 38(3-5):241-7. PubMed ID: 16600360
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein binding site prediction using an empirical scoring function.
    Liang S; Zhang C; Liu S; Zhou Y
    Nucleic Acids Res; 2006; 34(13):3698-707. PubMed ID: 16893954
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A neural network method for identification of RNA-interacting residues in protein.
    Jeong E; Chung IF; Miyano S
    Genome Inform; 2004; 15(1):105-16. PubMed ID: 15712114
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting key long-range interaction sites by B-factors.
    Chen P; Han K; Li X; Huang DS
    Protein Pept Lett; 2008; 15(5):478-83. PubMed ID: 18537737
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.
    Fuchs A; Kirschner A; Frishman D
    Proteins; 2009 Mar; 74(4):857-71. PubMed ID: 18704938
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structure-based prediction of protein- peptide binding regions using Random Forest.
    Taherzadeh G; Zhou Y; Liew AW; Yang Y
    Bioinformatics; 2018 Feb; 34(3):477-484. PubMed ID: 29028926
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.