157 related articles for article (PubMed ID: 12785867)
1. 8-Oxoguanine enhances bending of DNA that favors binding to glycosylases.
Miller JH; Fan-Chiang CC; Straatsma TP; Kennedy MA
J Am Chem Soc; 2003 May; 125(20):6331-6. PubMed ID: 12785867
[TBL] [Abstract][Full Text] [Related]
2. Molecular dynamics simulation of 8-oxoguanine containing DNA fragments reveals altered hydration and ion binding patterns.
Naômé A; Schyman P; Laaksonen A; Vercauteren DP
J Phys Chem B; 2010 Apr; 114(14):4789-801. PubMed ID: 20307074
[TBL] [Abstract][Full Text] [Related]
3. MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily.
Guan Y; Manuel RC; Arvai AS; Parikh SS; Mol CD; Miller JH; Lloyd S; Tainer JA
Nat Struct Biol; 1998 Dec; 5(12):1058-64. PubMed ID: 9846876
[TBL] [Abstract][Full Text] [Related]
4. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility.
McConnell KJ; Beveridge DL
J Mol Biol; 2001 Nov; 314(1):23-40. PubMed ID: 11724529
[TBL] [Abstract][Full Text] [Related]
5. Molecular biology: ensuring error-free DNA repair.
Lindahl T
Nature; 2004 Feb; 427(6975):598. PubMed ID: 14961108
[No Abstract] [Full Text] [Related]
6. Backbone dynamics of DNA containing 8-oxoguanine: importance for substrate recognition by base excision repair glycosylases.
Dodson ML; Lloyd RS
Mutat Res; 2001 Dec; 487(3-4):93-108. PubMed ID: 11738936
[TBL] [Abstract][Full Text] [Related]
7. Escherichia coli MutY and Fpg utilize a processive mechanism for target location.
Francis AW; David SS
Biochemistry; 2003 Jan; 42(3):801-10. PubMed ID: 12534293
[TBL] [Abstract][Full Text] [Related]
8. Thermodynamic, kinetic, and structural basis for recognition and repair of 8-oxoguanine in DNA by Fpg protein from Escherichia coli.
Ishchenko AA; Vasilenko NL; Sinitsina OI; Yamkovoy VI; Fedorova OS; Douglas KT; Nevinsky GA
Biochemistry; 2002 Jun; 41(24):7540-8. PubMed ID: 12056884
[TBL] [Abstract][Full Text] [Related]
9. [New non-hydrolyzable substrate analogs for 8-oxoguanine-DNA glycosylases].
Taraneneko MV; Volkov EM; Saparbarv MK; Kuznetsov SA
Mol Biol (Mosk); 2004; 38(5):858-68. PubMed ID: 15554188
[TBL] [Abstract][Full Text] [Related]
10. Reciprocal "flipping" underlies substrate recognition and catalytic activation by the human 8-oxo-guanine DNA glycosylase.
Bjørås M; Seeberg E; Luna L; Pearl LH; Barrett TE
J Mol Biol; 2002 Mar; 317(2):171-7. PubMed ID: 11902834
[TBL] [Abstract][Full Text] [Related]
11. Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM.
Fromme JC; Verdine GL
Nat Struct Biol; 2002 Jul; 9(7):544-52. PubMed ID: 12055620
[TBL] [Abstract][Full Text] [Related]
12. Arabidopsis thaliana Ogg1 protein excises 8-hydroxyguanine and 2,6-diamino-4-hydroxy-5-formamidopyrimidine from oxidatively damaged DNA containing multiple lesions.
Morales-Ruiz T; Birincioglu M; Jaruga P; Rodriguez H; Roldan-Arjona T; Dizdaroglu M
Biochemistry; 2003 Mar; 42(10):3089-95. PubMed ID: 12627976
[TBL] [Abstract][Full Text] [Related]
13. Global deformation facilitates flipping of damaged 8-oxo-guanine and guanine in DNA.
La Rosa G; Zacharias M
Nucleic Acids Res; 2016 Nov; 44(20):9591-9599. PubMed ID: 27651459
[TBL] [Abstract][Full Text] [Related]
14. 8-oxoguanine lesioned B-DNA molecule complexed with repair enzyme hOGG1: a molecular dynamics study.
Pinak M
J Comput Chem; 2003 May; 24(7):898-907. PubMed ID: 12692799
[TBL] [Abstract][Full Text] [Related]
15. Recent progress in the biology, chemistry and structural biology of DNA glycosylases.
Schärer OD; Jiricny J
Bioessays; 2001 Mar; 23(3):270-81. PubMed ID: 11223884
[TBL] [Abstract][Full Text] [Related]
16. Repair of tandem base lesions in DNA by human cell extracts generates persisting single-strand breaks.
Budworth H; Matthewman G; O'Neill P; Dianov GL
J Mol Biol; 2005 Sep; 351(5):1020-9. PubMed ID: 16054643
[TBL] [Abstract][Full Text] [Related]
17. A-Tract bending: insights into experimental structures by computational models.
Strahs D; Schlick T
J Mol Biol; 2000 Aug; 301(3):643-63. PubMed ID: 10966775
[TBL] [Abstract][Full Text] [Related]
18. Opening dynamics of 8-oxoguanine in DNA.
Every AE; Russu IM
J Mol Recognit; 2013 Apr; 26(4):175-80. PubMed ID: 23456741
[TBL] [Abstract][Full Text] [Related]
19. Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.
Young MA; Beveridge DL
J Mol Biol; 1998 Aug; 281(4):675-87. PubMed ID: 9710539
[TBL] [Abstract][Full Text] [Related]
20. A functional analysis of the DNA glycosylase activity of mouse MUTYH protein excising 2-hydroxyadenine opposite guanine in DNA.
Ushijima Y; Tominaga Y; Miura T; Tsuchimoto D; Sakumi K; Nakabeppu Y
Nucleic Acids Res; 2005; 33(2):672-82. PubMed ID: 15681617
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]