BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

169 related articles for article (PubMed ID: 12809494)

  • 1. HU protein employs similar mechanisms of minor-groove recognition in binding to different B-DNA sites: demonstration by Raman spectroscopy.
    Serban D; Benevides JM; Thomas GJ
    Biochemistry; 2003 Jun; 42(24):7390-9. PubMed ID: 12809494
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structural perturbations induced in linear and circular DNA by the architectural protein HU from Bacillus stearothermophilus.
    Benevides JM; Serban D; Thomas GJ
    Biochemistry; 2006 Apr; 45(16):5359-66. PubMed ID: 16618125
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mechanisms of specific and nonspecific binding of architectural proteins in prokaryotic gene regulation.
    Benevides JM; Danahy J; Kawakami J; Thomas GJ
    Biochemistry; 2008 Mar; 47(12):3855-62. PubMed ID: 18302340
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Partial B-to-A DNA transition upon minor groove binding of protein Sac7d monitored by Raman spectroscopy.
    Dostál L; Chen CY; Wang AH; Welfle H
    Biochemistry; 2004 Aug; 43(30):9600-9. PubMed ID: 15274614
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Asp34 of PvuII endonuclease is directly involved in DNA minor groove recognition and indirectly involved in catalysis.
    Horton JR; Nastri HG; Riggs PD; Cheng X
    J Mol Biol; 1998 Dec; 284(5):1491-504. PubMed ID: 9878366
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Compact form of DNA induced by DNA-binding protein HU.
    Endo T; Sasaki N; Tanaka I; Nakata M
    Biochem Biophys Res Commun; 2002 Jan; 290(1):546-51. PubMed ID: 11779206
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Raman spectroscopy of the Ff gene V protein and complexes with poly(dA): nonspecific DNA recognition and binding.
    Benevides JM; Terwilliger TC; Vohník S; Thomas GJ
    Biochemistry; 1996 Jul; 35(29):9603-9. PubMed ID: 8755742
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes.
    Sagi D; Friedman N; Vorgias C; Oppenheim AB; Stavans J
    J Mol Biol; 2004 Aug; 341(2):419-28. PubMed ID: 15276833
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Molecular mechanism of DNA recognition by the alpha subunit of the Oxytricha telomere binding protein.
    Laporte L; Benevides JM; Thomas GJ
    Biochemistry; 1999 Jan; 38(2):582-8. PubMed ID: 9888797
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A-form conformational motifs in ligand-bound DNA structures.
    Lu XJ; Shakked Z; Olson WK
    J Mol Biol; 2000 Jul; 300(4):819-40. PubMed ID: 10891271
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure and dynamics of the DNA-binding protein HU of B. stearothermophilus investigated by Raman and ultraviolet-resonance Raman spectroscopy.
    Serban D; Arcineigas SF; Vorgias CE; Thomas GJ
    Protein Sci; 2003 Apr; 12(4):861-70. PubMed ID: 12649443
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Elongational flow studies on conformational change in DNA induced by DNA-binding protein HU.
    Endoh T; Iyaguchi D; Sasaki N; Tanaka I; Nakata M
    Biopolymers; 2003 Apr; 68(4):486-96. PubMed ID: 12666174
    [TBL] [Abstract][Full Text] [Related]  

  • 13. High-affinity DNA binding of HU protein from the hyperthermophile Thermotoga maritima.
    Grove A; Lim L
    J Mol Biol; 2001 Aug; 311(3):491-502. PubMed ID: 11493003
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Solution structure of the HU protein from Bacillus stearothermophilus.
    Vis H; Mariani M; Vorgias CE; Wilson KS; Kaptein R; Boelens R
    J Mol Biol; 1995 Dec; 254(4):692-703. PubMed ID: 7500343
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching.
    Tolstorukov MY; Jernigan RL; Zhurkin VB
    J Mol Biol; 2004 Mar; 337(1):65-76. PubMed ID: 15001352
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Raman spectroscopy of DNA modified by intrastrand cross-links of antitumor cisplatin.
    Vrána O; Masek V; Drazan V; Brabec V
    J Struct Biol; 2007 Jul; 159(1):1-8. PubMed ID: 17321149
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The NMR solution structure of a mutant of the Max b/HLH/LZ free of DNA: insights into the specific and reversible DNA binding mechanism of dimeric transcription factors.
    Sauvé S; Tremblay L; Lavigne P
    J Mol Biol; 2004 Sep; 342(3):813-32. PubMed ID: 15342239
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Local conformational changes induced in B-DNA by ethidium intercalation.
    Benevides JM; Thomas GJ
    Biochemistry; 2005 Mar; 44(8):2993-9. PubMed ID: 15723542
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Temperature dependence of the Raman spectrum of DNA. II. Raman signatures of premelting and melting transitions of poly(dA).poly(dT) and comparison with poly(dA-dT).poly(dA-dT).
    Movileanu L; Benevides JM; Thomas GJ
    Biopolymers; 2002 Mar; 63(3):181-94. PubMed ID: 11787006
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The role of DNA structure and dynamics in the recognition of bovine papillomavirus E2 protein target sequences.
    Djuranovic D; Oguey C; Hartmann B
    J Mol Biol; 2004 Jun; 339(4):785-96. PubMed ID: 15165850
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.