BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

175 related articles for article (PubMed ID: 12823003)

  • 1. Titration in silico of reversible B <=> A transitions in DNA.
    Mazur AK
    J Am Chem Soc; 2003 Jul; 125(26):7849-59. PubMed ID: 12823003
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DNA structure: what's in charge?
    McConnell KJ; Beveridge DL
    J Mol Biol; 2000 Dec; 304(5):803-20. PubMed ID: 11124028
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The electrostatic contribution to the B to Z transition of DNA.
    Misra VK; Honig B
    Biochemistry; 1996 Jan; 35(4):1115-24. PubMed ID: 8573566
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ion dynamics and water percolation effects in DNA polymorphism.
    Brovchenko I; Krukau A; Oleinikova A; Mazur AK
    J Am Chem Soc; 2008 Jan; 130(1):121-31. PubMed ID: 18052374
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Modeling high-resolution hydration patterns in correlation with DNA sequence and conformation.
    Feig M; Pettitt BM
    J Mol Biol; 1999 Mar; 286(4):1075-95. PubMed ID: 10047483
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A molecular simulation picture of DNA hydration around A- and B-DNA.
    Feig M; Pettitt BM
    Biopolymers; 1998; 48(4):199-209. PubMed ID: 10699840
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics simulation study of oriented polyamine- and Na-DNA: sequence specific interactions and effects on DNA structure.
    Korolev N; Lyubartsev AP; Laaksonen A; Nordenskiöld L
    Biopolymers; 2004 Apr; 73(5):542-55. PubMed ID: 15048778
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural properties of polymeric DNA from molecular dynamics simulations.
    Samanta S; Mukherjee S; Chakrabarti J; Bhattacharyya D
    J Chem Phys; 2009 Mar; 130(11):115103. PubMed ID: 19317569
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Approach to the limit of counterion condensation.
    Fenley MO; Manning GS; Olson WK
    Biopolymers; 1990; 30(13-14):1191-203. PubMed ID: 2085657
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Spermine: an "invisible" component in the crystals of B-DNA. A grand canonical Monte Carlo and molecular dynamics simulation study.
    Korolev N; Lyubartsev AP; Nordenskiöld L; Laaksonen A
    J Mol Biol; 2001 May; 308(5):907-17. PubMed ID: 11352581
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The electrostatic origin of low-hydration polymorphism in DNA.
    Mazur AK
    Chemphyschem; 2008 Dec; 9(18):2691-4. PubMed ID: 19006154
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Electrostatic free energy of the DNA double helix in counterion condensation theory.
    Manning GS
    Biophys Chem; 2002 Dec; 101-102():461-73. PubMed ID: 12488020
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Recognition of RNA by amide modified backbone nucleic acids: molecular dynamics simulations of DNA-RNA hybrids in aqueous solution.
    Nina M; Fonné-Pfister R; Beaudegnies R; Chekatt H; Jung PM; Murphy-Kessabi F; De Mesmaeker A; Wendeborn S
    J Am Chem Soc; 2005 Apr; 127(16):6027-38. PubMed ID: 15839703
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Mutual interactions of the phosphate groups in locally deformed backbones of various DNA double helices at high salt concentrations.
    Jursa J; Kypr J
    Gen Physiol Biophys; 1990 Oct; 9(5):465-76. PubMed ID: 2269419
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Electrostatic, steric, and hydration interactions favor Na(+) condensation around DNA compared with K(+).
    Savelyev A; Papoian GA
    J Am Chem Soc; 2006 Nov; 128(45):14506-18. PubMed ID: 17090034
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [The effect of hydrogen ions on the B-A transition in DNA].
    Montrel' MM; Sukhorukov BI
    Mol Biol (Mosk); 1989; 23(3):699-707. PubMed ID: 2770739
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Double-helical --> ladder structural transition in the B-DNA is induced by a loss of dispersion energy.
    Cerný J; Kabelác M; Hobza P
    J Am Chem Soc; 2008 Nov; 130(47):16055-9. PubMed ID: 18975944
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Role of aromacity, ring strain, and stereochemistry of selected disulfides and their congeners in the oxidative linkage of DNA strands at the major groove. A computational study.
    Izsak R; Jojart B; Csizmadia IG; Viskolcz B
    J Chem Inf Model; 2006; 46(6):2527-36. PubMed ID: 17125193
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular dynamics simulations of DNA curvature and flexibility: helix phasing and premelting.
    Beveridge DL; Dixit SB; Barreiro G; Thayer KM
    Biopolymers; 2004 Feb; 73(3):380-403. PubMed ID: 14755574
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Forces driving the binding of homeodomains to DNA.
    Dragan AI; Li Z; Makeyeva EN; Milgotina EI; Liu Y; Crane-Robinson C; Privalov PL
    Biochemistry; 2006 Jan; 45(1):141-51. PubMed ID: 16388589
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.