106 related articles for article (PubMed ID: 12824366)
1. ETOPE: Evolutionary test of predicted exons.
Nekrutenko A; Chung WY; Li WH
Nucleic Acids Res; 2003 Jul; 31(13):3564-7. PubMed ID: 12824366
[TBL] [Abstract][Full Text] [Related]
2. GeneAlign: a coding exon prediction tool based on phylogenetical comparisons.
Hsieh SJ; Lin CY; Liu NH; Chow WY; Tang CY
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W280-4. PubMed ID: 16845010
[TBL] [Abstract][Full Text] [Related]
3. Improving the specificity of exon prediction using comparative genomics.
Wu J
BMC Genomics; 2008 Sep; 9 Suppl 2(Suppl 2):S13. PubMed ID: 18831778
[TBL] [Abstract][Full Text] [Related]
4. GeneFizz: A web tool to compare genetic (coding/non-coding) and physical (helix/coil) segmentations of DNA sequences. Gene discovery and evolutionary perspectives.
Yeramian E; Jones L
Nucleic Acids Res; 2003 Jul; 31(13):3843-9. PubMed ID: 12824434
[TBL] [Abstract][Full Text] [Related]
5. SWAKK: a web server for detecting positive selection in proteins using a sliding window substitution rate analysis.
Liang H; Zhou W; Landweber LF
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W382-4. PubMed ID: 16845032
[TBL] [Abstract][Full Text] [Related]
6. SVC: structured visualization of evolutionary sequence conservation.
Roepcke S; Fiziev P; Seeburg PH; Vingron M
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W271-3. PubMed ID: 15991338
[TBL] [Abstract][Full Text] [Related]
7. OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals.
Douzery EJ; Scornavacca C; Romiguier J; Belkhir K; Galtier N; Delsuc F; Ranwez V
Mol Biol Evol; 2014 Jul; 31(7):1923-8. PubMed ID: 24723423
[TBL] [Abstract][Full Text] [Related]
8. Paircomp, FamilyRelationsII and Cartwheel: tools for interspecific sequence comparison.
Brown CT; Xie Y; Davidson EH; Cameron RA
BMC Bioinformatics; 2005 Mar; 6():70. PubMed ID: 15790396
[TBL] [Abstract][Full Text] [Related]
9. RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.
Wernersson R; Pedersen AG
Nucleic Acids Res; 2003 Jul; 31(13):3537-9. PubMed ID: 12824361
[TBL] [Abstract][Full Text] [Related]
10. YASS: enhancing the sensitivity of DNA similarity search.
Noé L; Kucherov G
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W540-3. PubMed ID: 15980530
[TBL] [Abstract][Full Text] [Related]
11. MutScreener: primer design tool for PCR-direct sequencing.
Yao F; Zhang R; Zhu Z; Xia K; Liu C
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W660-4. PubMed ID: 16845093
[TBL] [Abstract][Full Text] [Related]
12. Empirical codon substitution matrix.
Schneider A; Cannarozzi GM; Gonnet GH
BMC Bioinformatics; 2005 Jun; 6():134. PubMed ID: 15927081
[TBL] [Abstract][Full Text] [Related]
13. MGAlignIt: A web service for the alignment of mRNA/EST and genomic sequences.
Lee BT; Tan TW; Ranganathan S
Nucleic Acids Res; 2003 Jul; 31(13):3533-6. PubMed ID: 12824360
[TBL] [Abstract][Full Text] [Related]
14. PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments.
Suyama M; Torrents D; Bork P
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W609-12. PubMed ID: 16845082
[TBL] [Abstract][Full Text] [Related]
15. Manipulating multiple sequence alignments via MaM and WebMaM.
Alkan C; Tüzün E; Buard J; Lethiec F; Eichler EE; Bailey JA; Sahinalp SC
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W295-8. PubMed ID: 15980474
[TBL] [Abstract][Full Text] [Related]
16. ESTviewer: a web interface for visualizing mouse, rat, cattle, pig and chicken conserved ESTs in human genes and human alternatively spliced variants.
Chen FC; Chuang TJ
Bioinformatics; 2005 May; 21(10):2510-3. PubMed ID: 15722373
[TBL] [Abstract][Full Text] [Related]
17. MAVID multiple alignment server.
Bray N; Pachter L
Nucleic Acids Res; 2003 Jul; 31(13):3525-6. PubMed ID: 12824358
[TBL] [Abstract][Full Text] [Related]
18. MicroFootPrinter: a tool for phylogenetic footprinting in prokaryotic genomes.
Neph S; Tompa M
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W366-8. PubMed ID: 16845027
[TBL] [Abstract][Full Text] [Related]
19. MBEToolbox: a MATLAB toolbox for sequence data analysis in molecular biology and evolution.
Cai JJ; Smith DK; Xia X; Yuen KY
BMC Bioinformatics; 2005 Mar; 6():64. PubMed ID: 15780146
[TBL] [Abstract][Full Text] [Related]
20. Computational discovery of human coding and non-coding transcripts with conserved splice sites.
Rose D; Hiller M; Schutt K; Hackermüller J; Backofen R; Stadler PF
Bioinformatics; 2011 Jul; 27(14):1894-900. PubMed ID: 21622663
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
