These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. A benchmark server using high resolution protein structure data, and benchmark results for membrane helix predictions. Rath EM; Tessier D; Campbell AA; Lee HC; Werner T; Salam NK; Lee LK; Church WB BMC Bioinformatics; 2013 Mar; 14():111. PubMed ID: 23530628 [TBL] [Abstract][Full Text] [Related]
3. TMpro web server and web service: transmembrane helix prediction through amino acid property analysis. Ganapathiraju M; Jursa CJ; Karimi HA; Klein-Seetharaman J Bioinformatics; 2007 Oct; 23(20):2795-6. PubMed ID: 17724062 [TBL] [Abstract][Full Text] [Related]
5. Computational differentiation of N-terminal signal peptides and transmembrane helices. Yuan Z; Davis MJ; Zhang F; Teasdale RD Biochem Biophys Res Commun; 2003 Dec; 312(4):1278-83. PubMed ID: 14652012 [TBL] [Abstract][Full Text] [Related]
6. WRF-TMH: predicting transmembrane helix by fusing composition index and physicochemical properties of amino acids. Hayat M; Khan A Amino Acids; 2013 May; 44(5):1317-28. PubMed ID: 23494269 [TBL] [Abstract][Full Text] [Related]
7. NORSp: Predictions of long regions without regular secondary structure. Liu J; Rost B Nucleic Acids Res; 2003 Jul; 31(13):3833-5. PubMed ID: 12824431 [TBL] [Abstract][Full Text] [Related]
8. Enhanced recognition of protein transmembrane domains with prediction-based structural profiles. Cao B; Porollo A; Adamczak R; Jarrell M; Meller J Bioinformatics; 2006 Feb; 22(3):303-9. PubMed ID: 16293670 [TBL] [Abstract][Full Text] [Related]
9. TRAMPLE: the transmembrane protein labelling environment. Fariselli P; Finelli M; Rossi I; Amico M; Zauli A; Martelli PL; Casadio R Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W198-201. PubMed ID: 15980454 [TBL] [Abstract][Full Text] [Related]
10. BPROMPT: A consensus server for membrane protein prediction. Taylor PD; Attwood TK; Flower DR Nucleic Acids Res; 2003 Jul; 31(13):3698-700. PubMed ID: 12824397 [TBL] [Abstract][Full Text] [Related]
13. MemType-2L: a web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM. Chou KC; Shen HB Biochem Biophys Res Commun; 2007 Aug; 360(2):339-45. PubMed ID: 17586467 [TBL] [Abstract][Full Text] [Related]
14. Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain information. Lee S; Lee B; Jang I; Kim S; Bhak J Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W99-103. PubMed ID: 16845118 [TBL] [Abstract][Full Text] [Related]
15. TMM@: a web application for the analysis of transmembrane helix mobility. Skjaerven L; Jonassen I; Reuter N BMC Bioinformatics; 2007 Jul; 8():232. PubMed ID: 17601351 [TBL] [Abstract][Full Text] [Related]
16. AlignMe--a membrane protein sequence alignment web server. Stamm M; Staritzbichler R; Khafizov K; Forrest LR Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W246-51. PubMed ID: 24753425 [TBL] [Abstract][Full Text] [Related]
17. META-PP: single interface to crucial prediction servers. Eyrich VA; Rost B Nucleic Acids Res; 2003 Jul; 31(13):3308-10. PubMed ID: 12824314 [TBL] [Abstract][Full Text] [Related]
19. HELIQUEST: a web server to screen sequences with specific alpha-helical properties. Gautier R; Douguet D; Antonny B; Drin G Bioinformatics; 2008 Sep; 24(18):2101-2. PubMed ID: 18662927 [TBL] [Abstract][Full Text] [Related]
20. How strongly do sequence conservation patterns and empirical scales correlate with exposure patterns of transmembrane helices of membrane proteins? Park Y; Helms V Biopolymers; 2006 Nov; 83(4):389-99. PubMed ID: 16838301 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]