279 related articles for article (PubMed ID: 12832456)
1. The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: I. Statistically annotated datasets for peptide sequences and proteins identified via the application of ICAT and tandem mass spectrometry to proteins copurifying with T cell lipid rafts.
von Haller PD; Yi E; Donohoe S; Vaughn K; Keller A; Nesvizhskii AI; Eng J; Li XJ; Goodlett DR; Aebersold R; Watts JD
Mol Cell Proteomics; 2003 Jul; 2(7):426-7. PubMed ID: 12832456
[TBL] [Abstract][Full Text] [Related]
2. The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: II. Evaluation of tandem mass spectrometry methodologies for large-scale protein analysis, and the application of statistical tools for data analysis and interpretation.
von Haller PD; Yi E; Donohoe S; Vaughn K; Keller A; Nesvizhskii AI; Eng J; Li XJ; Goodlett DR; Aebersold R; Watts JD
Mol Cell Proteomics; 2003 Jul; 2(7):428-42. PubMed ID: 12832459
[TBL] [Abstract][Full Text] [Related]
3. A dataset of human liver proteins identified by protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry.
Yan W; Lee H; Deutsch EW; Lazaro CA; Tang W; Chen E; Fausto N; Katze MG; Aebersold R
Mol Cell Proteomics; 2004 Oct; 3(10):1039-41. PubMed ID: 15269248
[TBL] [Abstract][Full Text] [Related]
4. The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments.
Cannataro M; Cuda G; Gaspari M; Greco S; Tradigo G; Veltri P
BMC Bioinformatics; 2007 Jul; 8():255. PubMed ID: 17631686
[TBL] [Abstract][Full Text] [Related]
5. A comparative evaluation of software for the analysis of liquid chromatography-tandem mass spectrometry data from isotope coded affinity tag experiments.
Moulder R; Filén JJ; Salmi J; Katajamaa M; Nevalainen OS; Oresic M; Aittokallio T; Lahesmaa R; Nyman TA
Proteomics; 2005 Jul; 5(11):2748-60. PubMed ID: 15952233
[TBL] [Abstract][Full Text] [Related]
6. The Isotope-Coded Affinity Tag Method for Quantitative Protein Profile Comparison and Relative Quantitation of Cysteine Redox Modifications.
Chan JCY; Zhou L; Chan ECY
Curr Protoc Protein Sci; 2015 Nov; 82():23.2.1-23.2.19. PubMed ID: 26521713
[TBL] [Abstract][Full Text] [Related]
7. Increased quantitative proteome coverage with (13)C/(12)C-based, acid-cleavable isotope-coded affinity tag reagent and modified data acquisition scheme.
Yi EC; Li XJ; Cooke K; Lee H; Raught B; Page A; Aneliunas V; Hieter P; Goodlett DR; Aebersold R
Proteomics; 2005 Feb; 5(2):380-7. PubMed ID: 15648049
[TBL] [Abstract][Full Text] [Related]
8. Mass spectrometric analysis of protein mixtures at low levels using cleavable 13C-isotope-coded affinity tag and multidimensional chromatography.
Hansen KC; Schmitt-Ulms G; Chalkley RJ; Hirsch J; Baldwin MA; Burlingame AL
Mol Cell Proteomics; 2003 May; 2(5):299-314. PubMed ID: 12766231
[TBL] [Abstract][Full Text] [Related]
9. Comparison of protein expression by isotope-coded affinity tag labeling.
Xiao Z; Veenstra TD
Methods Mol Biol; 2008; 428():181-92. PubMed ID: 18287774
[TBL] [Abstract][Full Text] [Related]
10. Synthesis of acid-cleavable light isotope-coded affinity tags (ICAT-L) for potential use in proteomic expression profiling analysis.
Fauq AH; Kache R; Khan MA; Vega IE
Bioconjug Chem; 2006; 17(1):248-54. PubMed ID: 16417277
[TBL] [Abstract][Full Text] [Related]
11. Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry.
Han DK; Eng J; Zhou H; Aebersold R
Nat Biotechnol; 2001 Oct; 19(10):946-51. PubMed ID: 11581660
[TBL] [Abstract][Full Text] [Related]
12. Low-energy collision-induced dissociation fragmentation analysis of cysteinyl-modified peptides.
Borisov OV; Goshe MB; Conrads TP; Rakov VS; Veenstra TD; Smith RD
Anal Chem; 2002 May; 74(10):2284-92. PubMed ID: 12038753
[TBL] [Abstract][Full Text] [Related]
13. Systematic uncovering of multiple pathways underlying the pathology of Huntington disease by an acid-cleavable isotope-coded affinity tag approach.
Chiang MC; Juo CG; Chang HH; Chen HM; Yi EC; Chern Y
Mol Cell Proteomics; 2007 May; 6(5):781-97. PubMed ID: 17272267
[TBL] [Abstract][Full Text] [Related]
14. Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry.
Zhou H; Ranish JA; Watts JD; Aebersold R
Nat Biotechnol; 2002 May; 20(5):512-5. PubMed ID: 11981568
[TBL] [Abstract][Full Text] [Related]
15. A new protocol of analyzing isotope-coded affinity tag data from high-resolution LC-MS spectrometry.
Yu W; Liu J; Colangelo C; Gulcicek E; Zhao H
Comput Biol Chem; 2007 Jun; 31(3):215-21. PubMed ID: 17499548
[TBL] [Abstract][Full Text] [Related]
16. Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human endothelial cells.
Bouyssié D; Gonzalez de Peredo A; Mouton E; Albigot R; Roussel L; Ortega N; Cayrol C; Burlet-Schiltz O; Girard JP; Monsarrat B
Mol Cell Proteomics; 2007 Sep; 6(9):1621-37. PubMed ID: 17533220
[TBL] [Abstract][Full Text] [Related]
17. Added value for tandem mass spectrometry shotgun proteomics data validation through isoelectric focusing of peptides.
Heller M; Ye M; Michel PE; Morier P; Stalder D; Jünger MA; Aebersold R; Reymond F; Rossier JS
J Proteome Res; 2005; 4(6):2273-82. PubMed ID: 16335976
[TBL] [Abstract][Full Text] [Related]
18. Quantitative proteome analysis using isotope-coded affinity tags and mass spectrometry.
Shiio Y; Aebersold R
Nat Protoc; 2006; 1(1):139-45. PubMed ID: 17406225
[TBL] [Abstract][Full Text] [Related]
19. Identification of cellular MMP substrates using quantitative proteomics: isotope-coded affinity tags (ICAT) and isobaric tags for relative and absolute quantification (iTRAQ).
Butler GS; Dean RA; Morrison CJ; Overall CM
Methods Mol Biol; 2010; 622():451-70. PubMed ID: 20135298
[TBL] [Abstract][Full Text] [Related]
20. Functional proteomics approaches for the identification of transnitrosylase and denitrosylase targets.
Wu C; Parrott AM; Liu T; Beuve A; Li H
Methods; 2013 Aug; 62(2):151-60. PubMed ID: 23428400
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]