131 related articles for article (PubMed ID: 12866046)
21. Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling.
Petrey D; Xiang Z; Tang CL; Xie L; Gimpelev M; Mitros T; Soto CS; Goldsmith-Fischman S; Kernytsky A; Schlessinger A; Koh IY; Alexov E; Honig B
Proteins; 2003; 53 Suppl 6():430-5. PubMed ID: 14579332
[TBL] [Abstract][Full Text] [Related]
22. The thioredoxin-like fold: hidden domains in protein disulfide isomerases and other chaperone proteins.
Clissold PM; Bicknell R
Bioessays; 2003 Jun; 25(6):603-11. PubMed ID: 12766950
[TBL] [Abstract][Full Text] [Related]
23. Plasmodium falciparum glutaredoxin-like proteins.
Deponte M; Becker K; Rahlfs S
Biol Chem; 2005 Jan; 386(1):33-40. PubMed ID: 15843145
[TBL] [Abstract][Full Text] [Related]
24. Structural elements responsible for transglutaminase activity of protein disulphide isomerases and thioredoxins.
Blaskó B; Mádi A; Fésüs L
J Biol Regul Homeost Agents; 2004; 18(1):1-8. PubMed ID: 15323354
[TBL] [Abstract][Full Text] [Related]
25. High-resolution structure of recombinant Trichomonas vaginalis thioredoxin.
Iulek J; Alphey MS; Westrop GD; Coombs GH; Hunter WN
Acta Crystallogr D Biol Crystallogr; 2006 Feb; 62(Pt 2):216-20. PubMed ID: 16421453
[TBL] [Abstract][Full Text] [Related]
26. The ubiquitin domain superfold: structure-based sequence alignments and characterization of binding epitopes.
Kiel C; Serrano L
J Mol Biol; 2006 Jan; 355(4):821-44. PubMed ID: 16310215
[TBL] [Abstract][Full Text] [Related]
27. Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: application.
Stevens FJ; Kuemmel C; Babnigg G; Collart FR
J Mol Recognit; 2005; 18(2):150-7. PubMed ID: 15593246
[TBL] [Abstract][Full Text] [Related]
28. The emergence of catalytic and structural diversity within the beta-clip fold.
Iyer LM; Aravind L
Proteins; 2004 Jun; 55(4):977-91. PubMed ID: 15146494
[TBL] [Abstract][Full Text] [Related]
29. Structure of Mycobacterium tuberculosis thioredoxin C.
Hall G; Shah M; McEwan PA; Laughton C; Stevens M; Westwell A; Emsley J
Acta Crystallogr D Biol Crystallogr; 2006 Dec; 62(Pt 12):1453-7. PubMed ID: 17139080
[TBL] [Abstract][Full Text] [Related]
30. The crystal structure of Mycobacterium tuberculosis NrdH at 0.87 Å suggests a possible mode of its activity.
Phulera S; Mande SC
Biochemistry; 2013 Jun; 52(23):4056-65. PubMed ID: 23675692
[TBL] [Abstract][Full Text] [Related]
31. Theoretical model of restriction endonuclease HpaI in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis.
Skowronek KJ; Kosinski J; Bujnicki JM
Proteins; 2006 Jun; 63(4):1059-68. PubMed ID: 16498623
[TBL] [Abstract][Full Text] [Related]
32. Biochemical characterization and crystal structure of a Dim1 family associated protein: Dim2.
Simeoni F; Arvai A; Bello P; Gondeau C; Hopfner KP; Neyroz P; Heitz F; Tainer J; Divita G
Biochemistry; 2005 Sep; 44(36):11997-2008. PubMed ID: 16142897
[TBL] [Abstract][Full Text] [Related]
33. Sequence comparison and protein structure prediction.
Dunbrack RL
Curr Opin Struct Biol; 2006 Jun; 16(3):374-84. PubMed ID: 16713709
[TBL] [Abstract][Full Text] [Related]
34. Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein.
Goroncy AK; Koshiba S; Tochio N; Tomizawa T; Inoue M; Tanaka A; Sugano S; Kigawa T; Yokoyama S
Proteins; 2010 Jul; 78(9):2176-80. PubMed ID: 20455272
[No Abstract] [Full Text] [Related]
35. Novel use of a genetic algorithm for protein structure prediction: searching template and sequence alignment space.
Contreras-Moreira B; Fitzjohn PW; Offman M; Smith GR; Bates PA
Proteins; 2003; 53 Suppl 6():424-9. PubMed ID: 14579331
[TBL] [Abstract][Full Text] [Related]
36. The structure of the periplasmic thiol-disulfide oxidoreductase SoxS from Paracoccus pantotrophus indicates a triple Trx/Grx/DsbC functionality in chemotrophic sulfur oxidation.
Carius Y; Rother D; Friedrich CG; Scheidig AJ
Acta Crystallogr D Biol Crystallogr; 2009 Mar; 65(Pt 3):229-40. PubMed ID: 19237745
[TBL] [Abstract][Full Text] [Related]
37. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
Najmanovich R; Kurbatova N; Thornton J
Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
[TBL] [Abstract][Full Text] [Related]
38. FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments.
Saini HK; Fischer D
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W499-502. PubMed ID: 17537819
[TBL] [Abstract][Full Text] [Related]
39. Structural basis for target protein recognition by the protein disulfide reductase thioredoxin.
Maeda K; Hägglund P; Finnie C; Svensson B; Henriksen A
Structure; 2006 Nov; 14(11):1701-10. PubMed ID: 17098195
[TBL] [Abstract][Full Text] [Related]
40. Protein structure mining using a structural alphabet.
Tyagi M; de Brevern AG; Srinivasan N; Offmann B
Proteins; 2008 May; 71(2):920-37. PubMed ID: 18004784
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
