These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

222 related articles for article (PubMed ID: 12910454)

  • 21. CoagMDB: a database analysis of missense mutations within four conserved domains in five vitamin K-dependent coagulation serine proteases using a text-mining tool.
    Saunders RE; Perkins SJ
    Hum Mutat; 2008 Mar; 29(3):333-44. PubMed ID: 18058827
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Residue-residue contact substitution probabilities derived from aligned three-dimensional structures and the identification of common folds.
    Rodionov MA; Johnson MS
    Protein Sci; 1994 Dec; 3(12):2366-77. PubMed ID: 7756991
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
    Pei J; Cai W; Kinch LN; Grishin NV
    Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Discarding functional residues from the substitution table improves predictions of active sites within three-dimensional structures.
    Gong S; Blundell TL
    PLoS Comput Biol; 2008 Oct; 4(10):e1000179. PubMed ID: 18833291
    [TBL] [Abstract][Full Text] [Related]  

  • 25. FASSM: enhanced function association in whole genome analysis using sequence and structural motifs.
    Gaurav K; Gupta N; Sowdhamini R
    In Silico Biol; 2005; 5(5-6):425-38. PubMed ID: 16268788
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Evolutionary patterns of retinal-binding pockets of type I rhodopsins and their functions.
    Adamian L; Ouyang Z; Tseng YY; Liang J
    Photochem Photobiol; 2006; 82(6):1426-35. PubMed ID: 16922602
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Non-functional conserved residues in globins and their possible role as a folding nucleus.
    Ptitsyn OB; Ting KL
    J Mol Biol; 1999 Aug; 291(3):671-82. PubMed ID: 10448045
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Subtilases: the superfamily of subtilisin-like serine proteases.
    Siezen RJ; Leunissen JA
    Protein Sci; 1997 Mar; 6(3):501-23. PubMed ID: 9070434
    [TBL] [Abstract][Full Text] [Related]  

  • 29. A simple physical model for the prediction and design of protein-DNA interactions.
    Havranek JJ; Duarte CM; Baker D
    J Mol Biol; 2004 Nov; 344(1):59-70. PubMed ID: 15504402
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Variation in structural location and amino acid conservation of functional sites in protein domain families.
    Pils B; Copley RR; Schultz J
    BMC Bioinformatics; 2005 Aug; 6():210. PubMed ID: 16122386
    [TBL] [Abstract][Full Text] [Related]  

  • 31. A new method for identification of protein (sub)families in a set of proteins based on hydropathy distribution in proteins.
    Pánek J; Eidhammer I; Aasland R
    Proteins; 2005 Mar; 58(4):923-34. PubMed ID: 15645428
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Bayesian search of functionally divergent protein subgroups and their function specific residues.
    Marttinen P; Corander J; Törönen P; Holm L
    Bioinformatics; 2006 Oct; 22(20):2466-74. PubMed ID: 16870932
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Functional restraints on the patterns of amino acid substitutions: application to sequence-structure homology recognition.
    Chelliah V; Blundell T; Mizuguchi K
    Proteins; 2005 Dec; 61(4):722-31. PubMed ID: 16193489
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Identification and analysis of a new family of bacterial serine proteinases.
    Pandit SB; Srinivasan N
    In Silico Biol; 2004; 4(4):563-72. PubMed ID: 15752073
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins.
    Baussand J; Deremble C; Carbone A
    Proteins; 2007 May; 67(3):695-708. PubMed ID: 17299747
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations.
    Sippl MJ; Weitckus S
    Proteins; 1992 Jul; 13(3):258-71. PubMed ID: 1603814
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Prediction of functional sites by analysis of sequence and structure conservation.
    Panchenko AR; Kondrashov F; Bryant S
    Protein Sci; 2004 Apr; 13(4):884-92. PubMed ID: 15010543
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
    Najmanovich R; Kurbatova N; Thornton J
    Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A method to detect important residues using protein binding site comparison.
    Park K; Kim D
    Genome Inform; 2006; 17(2):216-25. PubMed ID: 17503394
    [TBL] [Abstract][Full Text] [Related]  

  • 40. ARCS: an aggregated related column scoring scheme for aligned sequences.
    Song B; Choi JH; Chen G; Szymanski J; Zhang GQ; Tung AK; Kang J; Kim S; Yang J
    Bioinformatics; 2006 Oct; 22(19):2326-32. PubMed ID: 16870930
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.