These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Detecting gene clusters under evolutionary constraint in a large number of genomes. Ling X; He X; Xin D Bioinformatics; 2009 Mar; 25(5):571-7. PubMed ID: 19158161 [TBL] [Abstract][Full Text] [Related]
3. Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes. Mirkin BG; Fenner TI; Galperin MY; Koonin EV BMC Evol Biol; 2003 Jan; 3():2. PubMed ID: 12515582 [TBL] [Abstract][Full Text] [Related]
6. Three Dimensional Organization of Genome Might Have Guided the Dynamics of Gene Order Evolution in Eukaryotes. Bagadia M; Singh A; Singh Sandhu K Genome Biol Evol; 2016 Apr; 8(3):946-54. PubMed ID: 26957031 [TBL] [Abstract][Full Text] [Related]
7. Clustering of gene ontology terms in genomes. Tiirikka T; Siermala M; Vihinen M Gene; 2014 Oct; 550(2):155-64. PubMed ID: 24995610 [TBL] [Abstract][Full Text] [Related]
8. Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context. Wolf YI; Rogozin IB; Kondrashov AS; Koonin EV Genome Res; 2001 Mar; 11(3):356-72. PubMed ID: 11230160 [TBL] [Abstract][Full Text] [Related]
9. Comparative genomics of ParaHox clusters of teleost fishes: gene cluster breakup and the retention of gene sets following whole genome duplications. Siegel N; Hoegg S; Salzburger W; Braasch I; Meyer A BMC Genomics; 2007 Sep; 8():312. PubMed ID: 17822543 [TBL] [Abstract][Full Text] [Related]
10. Two plus two does not equal three: statistical tests for multiple genome comparison. Raghupathy N; Hoberman R; Durand D J Bioinform Comput Biol; 2008 Feb; 6(1):1-22. PubMed ID: 18324742 [TBL] [Abstract][Full Text] [Related]
11. Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps. Tang H; Wang X; Bowers JE; Ming R; Alam M; Paterson AH Genome Res; 2008 Dec; 18(12):1944-54. PubMed ID: 18832442 [TBL] [Abstract][Full Text] [Related]
12. Comparative Methods for Reconstructing Ancient Genome Organization. Anselmetti Y; Luhmann N; Bérard S; Tannier E; Chauve C Methods Mol Biol; 2018; 1704():343-362. PubMed ID: 29277873 [TBL] [Abstract][Full Text] [Related]
13. Genome trees constructed using five different approaches suggest new major bacterial clades. Wolf YI; Rogozin IB; Grishin NV; Tatusov RL; Koonin EV BMC Evol Biol; 2001 Oct; 1():8. PubMed ID: 11734060 [TBL] [Abstract][Full Text] [Related]
14. Genomic exploration of the hemiascomycetous yeasts: 18. Comparative analysis of chromosome maps and synteny with Saccharomyces cerevisiae. Llorente B; Malpertuy A; Neuvéglise C; de Montigny J; Aigle M; Artiguenave F; Blandin G; Bolotin-Fukuhara M; Bon E; Brottier P; Casaregola S; Durrens P; Gaillardin C; Lépingle A; Ozier-Kalogéropoulos O; Potier S; Saurin W; Tekaia F; Toffano-Nioche C; Wésolowski-Louvel M; Wincker P; Weissenbach J; Souciet J; Dujon B FEBS Lett; 2000 Dec; 487(1):101-12. PubMed ID: 11152893 [TBL] [Abstract][Full Text] [Related]
15. The statistical analysis of spatially clustered genes under the maximum gap criterion. Hoberman R; Sankoff D; Durand D J Comput Biol; 2005 Oct; 12(8):1083-102. PubMed ID: 16241899 [TBL] [Abstract][Full Text] [Related]
16. Reconstruction of ancestral gene orders using intermediate genomes. Feijão P BMC Bioinformatics; 2015; 16 Suppl 14(Suppl 14):S3. PubMed ID: 26451811 [TBL] [Abstract][Full Text] [Related]