30 related articles for article (PubMed ID: 12949147)
1. Measuring the Temporal Structure in Serially-Sampled Phylogenies.
Gray RR; Pybus OG; Salemi M
Methods Ecol Evol; 2011 Oct; 2(5):437-445. PubMed ID: 22121470
[TBL] [Abstract][Full Text] [Related]
2. Repertoire-wide phylogenetic models of B cell molecular evolution reveal evolutionary signatures of aging and vaccination.
Hoehn KB; Vander Heiden JA; Zhou JQ; Lunter G; Pybus OG; Kleinstein SH
Proc Natl Acad Sci U S A; 2019 Nov; 116(45):22664-22672. PubMed ID: 31636219
[TBL] [Abstract][Full Text] [Related]
3. Clinical implications of evolutionary patterns of homologous, full-length hepatitis B virus quasispecies in different hosts after perinatal infection.
Liu F; Yu DM; Huang SY; Yu JL; Zhang DH; Gong QM; Zhang XX
J Clin Microbiol; 2014 May; 52(5):1556-65. PubMed ID: 24574300
[TBL] [Abstract][Full Text] [Related]
4. A framework including recombination for analyzing the dynamics of within-host HIV genetic diversity.
Sargsyan O
PLoS One; 2014; 9(2):e87655. PubMed ID: 24516557
[TBL] [Abstract][Full Text] [Related]
5. Genomic analysis of hepatitis B virus reveals antigen state and genotype as sources of evolutionary rate variation.
Harrison A; Lemey P; Hurles M; Moyes C; Horn S; Pryor J; Malani J; Supuri M; Masta A; Teriboriki B; Toatu T; Penny D; Rambaut A; Shapiro B
Viruses; 2011 Feb; 3(2):83-101. PubMed ID: 21765983
[TBL] [Abstract][Full Text] [Related]
6. The evolutionary rate dynamically tracks changes in HIV-1 epidemics: application of a simple method for optimizing the evolutionary rate in phylogenetic trees with longitudinal data.
Maljkovic Berry I; Athreya G; Kothari M; Daniels M; Bruno WJ; Korber B; Kuiken C; Ribeiro RM; Leitner T
Epidemics; 2009 Dec; 1(4):230-9. PubMed ID: 21352769
[TBL] [Abstract][Full Text] [Related]
7. Impact of CCR5delta32 host genetic background and disease progression on HIV-1 intrahost evolutionary processes: efficient hypothesis testing through hierarchical phylogenetic models.
Edo-Matas D; Lemey P; Tom JA; Serna-Bolea C; van den Blink AE; van 't Wout AB; Schuitemaker H; Suchard MA
Mol Biol Evol; 2011 May; 28(5):1605-16. PubMed ID: 21135151
[TBL] [Abstract][Full Text] [Related]
8. Summary statistics of neutral mutations in longitudinal DNA samples.
Liu X; Fu YX
Theor Popul Biol; 2008 Aug; 74(1):56-67. PubMed ID: 18547598
[TBL] [Abstract][Full Text] [Related]
9. Unequal evolutionary rates in the human immunodeficiency virus type 1 (HIV-1) pandemic: the evolutionary rate of HIV-1 slows down when the epidemic rate increases.
Maljkovic Berry I; Ribeiro R; Kothari M; Athreya G; Daniels M; Lee HY; Bruno W; Leitner T
J Virol; 2007 Oct; 81(19):10625-35. PubMed ID: 17634235
[TBL] [Abstract][Full Text] [Related]
10. Test of genetical isochronism for longitudinal samples of DNA sequences.
Liu X; Fu YX
Genetics; 2007 May; 176(1):327-42. PubMed ID: 17277372
[TBL] [Abstract][Full Text] [Related]
11. Inferring speciation times under an episodic molecular clock.
Rannala B; Yang Z
Syst Biol; 2007 Jun; 56(3):453-66. PubMed ID: 17558967
[TBL] [Abstract][Full Text] [Related]
12. HIV evolutionary dynamics within and among hosts.
Lemey P; Rambaut A; Pybus OG
AIDS Rev; 2006; 8(3):125-40. PubMed ID: 17078483
[TBL] [Abstract][Full Text] [Related]
13. Using models of nucleotide evolution to build phylogenetic trees.
Bos DH; Posada D
Dev Comp Immunol; 2005; 29(3):211-27. PubMed ID: 15572070
[TBL] [Abstract][Full Text] [Related]
14. Inferring evolutionary rates using serially sampled sequences from several populations.
Rodrigo AG; Goode M; Forsberg R; Ross HA; Drummond A
Mol Biol Evol; 2003 Dec; 20(12):2010-8. PubMed ID: 12949147
[TBL] [Abstract][Full Text] [Related]
15. Genetic analyses reveal structured HIV-1 populations in serially sampled T lymphocytes of patients receiving HAART.
Potter SJ; Lemey P; Dyer WB; Sullivan JS; Chew CB; Vandamme AM; Dwyer DE; Saksena NK
Virology; 2006 Apr; 348(1):35-46. PubMed ID: 16455126
[TBL] [Abstract][Full Text] [Related]
16. Modelling the evolution of protein coding sequences sampled from Measurably Evolving Populations.
Goode M; Guindon S; Rodrigo A
Genome Inform; 2008; 21():150-64. PubMed ID: 19425155
[TBL] [Abstract][Full Text] [Related]
17.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
18.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
19.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
