2609 related articles for article (PubMed ID: 12969510)
41. A natural barrier to lateral gene transfer from prokaryotes to eukaryotes revealed from genomes: the 70 % rule.
Ku C; Martin WF
BMC Biol; 2016 Oct; 14(1):89. PubMed ID: 27751184
[TBL] [Abstract][Full Text] [Related]
42. Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution.
Yutin N; Wolf YI; Raoult D; Koonin EV
Virol J; 2009 Dec; 6():223. PubMed ID: 20017929
[TBL] [Abstract][Full Text] [Related]
43. YOGY: a web-based, integrated database to retrieve protein orthologs and associated Gene Ontology terms.
Penkett CJ; Morris JA; Wood V; Bähler J
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W330-4. PubMed ID: 16845020
[TBL] [Abstract][Full Text] [Related]
44. Constant relative rate of protein evolution and detection of functional diversification among bacterial, archaeal and eukaryotic proteins.
Jordan IK; Kondrashov FA; Rogozin IB; Tatusov RL; Wolf YI; Koonin EV
Genome Biol; 2001; 2(12):RESEARCH0053. PubMed ID: 11790256
[TBL] [Abstract][Full Text] [Related]
45. Genomic analyses and the origin of the eukaryotes.
Rivera MC
Chem Biodivers; 2007 Nov; 4(11):2631-8. PubMed ID: 18027376
[TBL] [Abstract][Full Text] [Related]
46. u-Genome: a database on genome design in unicellular genomes.
Sakharkar KR; Chaturvedi I; Chow VT; Kwoh CK; Kangueane P; Sakharkar MK
In Silico Biol; 2005; 5(5-6):611-5. PubMed ID: 16610139
[TBL] [Abstract][Full Text] [Related]
47. MitoCOGs: clusters of orthologous genes from mitochondria and implications for the evolution of eukaryotes.
Kannan S; Rogozin IB; Koonin EV
BMC Evol Biol; 2014 Nov; 14():237. PubMed ID: 25421434
[TBL] [Abstract][Full Text] [Related]
48. Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.
Remm M; Storm CE; Sonnhammer EL
J Mol Biol; 2001 Dec; 314(5):1041-52. PubMed ID: 11743721
[TBL] [Abstract][Full Text] [Related]
49. Phylogenetic profiling in eukaryotes: The effect of species, orthologous group, and interactome selection on protein interaction prediction.
Deutekom ES; van Dam TJP; Snel B
PLoS One; 2022; 17(4):e0251833. PubMed ID: 35421089
[TBL] [Abstract][Full Text] [Related]
50. eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges.
Powell S; Szklarczyk D; Trachana K; Roth A; Kuhn M; Muller J; Arnold R; Rattei T; Letunic I; Doerks T; Jensen LJ; von Mering C; Bork P
Nucleic Acids Res; 2012 Jan; 40(Database issue):D284-9. PubMed ID: 22096231
[TBL] [Abstract][Full Text] [Related]
51. Genome and protein evolution in eukaryotes.
Copley RR; Letunic I; Bork P
Curr Opin Chem Biol; 2002 Feb; 6(1):39-45. PubMed ID: 11827821
[TBL] [Abstract][Full Text] [Related]
52. Evolutionary sequence analysis of complete eukaryote genomes.
Blair JE; Shah P; Hedges SB
BMC Bioinformatics; 2005 Mar; 6():53. PubMed ID: 15762985
[TBL] [Abstract][Full Text] [Related]
53. Investigating 42 candidate orthologous protein groups by molecular evolutionary analysis on genome scale.
Xie T; Ding D
Gene; 2000 Dec; 261(2):305-10. PubMed ID: 11167018
[TBL] [Abstract][Full Text] [Related]
54. An infrastructure for comparative genomics to functionally characterize genes and proteins.
Suter-Crazzolara C; Kurapkat G
Genome Inform Ser Workshop Genome Inform; 2000; 11():24-32. PubMed ID: 11700584
[TBL] [Abstract][Full Text] [Related]
55. Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea.
Koonin EV; Mushegian AR; Galperin MY; Walker DR
Mol Microbiol; 1997 Aug; 25(4):619-37. PubMed ID: 9379893
[TBL] [Abstract][Full Text] [Related]
56. Function-dependent clustering of orthologues and paralogues of cyclophilins.
Galat A
Proteins; 2004 Sep; 56(4):808-20. PubMed ID: 15281132
[TBL] [Abstract][Full Text] [Related]
57. Comparative assessment of performance and genome dependence among phylogenetic profiling methods.
Snitkin ES; Gustafson AM; Mellor J; Wu J; DeLisi C
BMC Bioinformatics; 2006 Sep; 7():420. PubMed ID: 17005048
[TBL] [Abstract][Full Text] [Related]
58. Comprehensive analysis of orthologous protein domains using the HOPS database.
Storm CE; Sonnhammer EL
Genome Res; 2003 Oct; 13(10):2353-62. PubMed ID: 14525933
[TBL] [Abstract][Full Text] [Related]
59. QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence.
Yu C; Desai V; Cheng L; Reifman J
BMC Bioinformatics; 2012 Jun; 13():143. PubMed ID: 22726705
[TBL] [Abstract][Full Text] [Related]
60. Prokaryotic homologs of the eukaryotic DNA-end-binding protein Ku, novel domains in the Ku protein and prediction of a prokaryotic double-strand break repair system.
Aravind L; Koonin EV
Genome Res; 2001 Aug; 11(8):1365-74. PubMed ID: 11483577
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
