These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

323 related articles for article (PubMed ID: 1323845)

  • 1. Antiparallel side-by-side dimeric motif for sequence-specific recognition in the minor groove of DNA by the designed peptide 1-methylimidazole-2-carboxamide netropsin.
    Mrksich M; Wade WS; Dwyer TJ; Geierstanger BH; Wemmer DE; Dervan PB
    Proc Natl Acad Sci U S A; 1992 Aug; 89(16):7586-90. PubMed ID: 1323845
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Binding affinities of synthetic peptides, pyridine-2-carboxamidonetropsin and 1-methylimidazole-2-carboxamidonetropsin, that form 2:1 complexes in the minor groove of double-helical DNA.
    Wade WS; Mrksich M; Dervan PB
    Biochemistry; 1993 Oct; 32(42):11385-9. PubMed ID: 8218203
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA.
    Geierstanger BH; Jacobsen JP; Mrksich M; Dervan PB; Wemmer DE
    Biochemistry; 1994 Mar; 33(10):3055-62. PubMed ID: 8130219
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.
    Bielawski K; Bielawska A; Bartulewicz D; Rózański A
    Acta Biochim Pol; 2000; 47(3):855-66. PubMed ID: 11310985
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Design of a G.C-specific DNA minor groove-binding peptide.
    Geierstanger BH; Mrksich M; Dervan PB; Wemmer DE
    Science; 1994 Oct; 266(5185):646-50. PubMed ID: 7939719
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Hairpin polyamides that use parallel and antiparallel side-by-side peptide motifs in binding to DNA.
    Surovaya AN; Burckhardt G; Grokhovsky SL; Birch-Hirschfeld E; Gursky GV; Zimmer C
    J Biomol Struct Dyn; 1997 Apr; 14(5):595-606. PubMed ID: 9130081
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA minor groove binding of cross-linked lexitropsins: experimental conditions required to observe the covalently linked WPPW (groove wall-peptide-peptide-groove wall) motif.
    Chen YH; Lown JW
    Biophys J; 1995 May; 68(5):2041-8. PubMed ID: 7612846
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interaction of minor groove ligands to an AAATT/AATTT site: correlation of thermodynamic characterization and solution structure.
    Rentzeperis D; Marky LA; Dwyer TJ; Geierstanger BH; Pelton JG; Wemmer DE
    Biochemistry; 1995 Mar; 34(9):2937-45. PubMed ID: 7893707
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Design of sequence-specific DNA binding ligands that use a two-stranded peptide motif for DNA sequence recognition.
    Nikolaev VA; Grokhovsky SL; Surovaya AN; Leinsoo TA; Sidorova NYu ; Zasedatelev AS; Zhuze AL; Strahan GA; Shafer RH; Gursky GV
    J Biomol Struct Dyn; 1996 Aug; 14(1):31-47. PubMed ID: 8877560
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The binding of prototype lexitropsins to the minor groove of DNA: quantum chemical studies.
    Mazurek P; Feng W; Shukla K; Sapse AM; Lown JW
    J Biomol Struct Dyn; 1991 Oct; 9(2):299-313. PubMed ID: 1660279
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G.
    Kopka ML; Goodsell DS; Han GW; Chiu TK; Lown JW; Dickerson RE
    Structure; 1997 Aug; 5(8):1033-46. PubMed ID: 9309219
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evidence that a minor groove-binding peptide and a major groove-binding protein can simultaneously occupy a common site on DNA.
    Oakley MG; Mrksich M; Dervan PB
    Biochemistry; 1992 Nov; 31(45):10969-75. PubMed ID: 1445835
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Synthesis and DNA-binding of acridine-netropsin hybrid molecules.
    Kubota Y; Kawamura S; Uchida R
    Nucleic Acids Symp Ser; 1999; (42):247-8. PubMed ID: 10780472
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Molecular recognition in noncovalent antitumor agent-DNA complexes: NMR studies of the base and sequence dependent recognition of the DNA minor groove by netropsin.
    Patel DJ; Shapiro L
    Biochimie; 1985; 67(7-8):887-915. PubMed ID: 3002497
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA.
    Geierstanger BH; Volkman BF; Kremer W; Wemmer DE
    Biochemistry; 1994 May; 33(17):5347-55. PubMed ID: 8172908
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Binding of distamycin A and netropsin to the 12mer DNA duplexes containing mixed AT.GC sequences with at most five or three successive AT base pairs.
    Lah J; Vesnaver G
    Biochemistry; 2000 Aug; 39(31):9317-26. PubMed ID: 10924125
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Progress in the design of DNA sequence-specific lexitropsins.
    Walker WL; Kopka ML; Goodsell DS
    Biopolymers; 1997; 44(4):323-34. PubMed ID: 9782774
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular dynamics simulations and free energy calculations of netropsin and distamycin binding to an AAAAA DNA binding site.
    Dolenc J; Oostenbrink C; Koller J; van Gunsteren WF
    Nucleic Acids Res; 2005; 33(2):725-33. PubMed ID: 15687382
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structural analysis of the binding modes of minor groove ligands comprised of disubstituted benzenes.
    Hawkins CA; Watson C; Yan Y; Gong B; Wemmer DE
    Nucleic Acids Res; 2001 Feb; 29(4):936-42. PubMed ID: 11160926
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Investigation of the Factors That Dictate the Preferred Orientation of Lexitropsins in the Minor Groove of DNA.
    Alniss HY; Witzel II; Semreen MH; Panda PK; Mishra YK; Ahuja R; Parkinson JA
    J Med Chem; 2019 Nov; 62(22):10423-10440. PubMed ID: 31658809
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.