BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

171 related articles for article (PubMed ID: 1373521)

  • 1. Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin.
    SantaLucia J; Kierzek R; Turner DH
    Science; 1992 Apr; 256(5054):217-9. PubMed ID: 1373521
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A network of heterogeneous hydrogen bonds in GNRA tetraloops.
    Jucker FM; Heus HA; Yip PF; Moors EH; Pardi A
    J Mol Biol; 1996 Dec; 264(5):968-80. PubMed ID: 9000624
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dynamics and stability of GCAA tetraloops with 2-aminopurine and purine substitutions.
    Sarzynska J; Kulinski T
    J Biomol Struct Dyn; 2005 Feb; 22(4):425-39. PubMed ID: 15588106
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Effects of base substitutions in an RNA hairpin from molecular dynamics and free energy simulations.
    Sarzynska J; Nilsson L; Kulinski T
    Biophys J; 2003 Dec; 85(6):3445-59. PubMed ID: 14645041
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops.
    Antao VP; Tinoco I
    Nucleic Acids Res; 1992 Feb; 20(4):819-24. PubMed ID: 1371866
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Thermodynamics of 2'-ribose substitutions in UUCG tetraloops.
    Williams DJ; Boots JL; Hall KB
    RNA; 2001 Jan; 7(1):44-53. PubMed ID: 11214179
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Structural features that give rise to the unusual stability of RNA hairpins containing GNRA loops.
    Heus HA; Pardi A
    Science; 1991 Jul; 253(5016):191-4. PubMed ID: 1712983
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU).
    Zhang H; Fountain MA; Krugh TR
    Biochemistry; 2001 Aug; 40(33):9879-86. PubMed ID: 11502181
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
    Chen X; McDowell JA; Kierzek R; Krugh TR; Turner DH
    Biochemistry; 2000 Aug; 39(30):8970-82. PubMed ID: 10913310
    [TBL] [Abstract][Full Text] [Related]  

  • 10. UNAC tetraloops: to what extent do they mimic GNRA tetraloops?
    Zhao Q; Huang HC; Nagaswamy U; Xia Y; Gao X; Fox GE
    Biopolymers; 2012 Aug; 97(8):617-28. PubMed ID: 22605553
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structure of an unusually stable RNA hairpin.
    Varani G; Cheong C; Tinoco I
    Biochemistry; 1991 Apr; 30(13):3280-9. PubMed ID: 1706937
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evidence that folding of an RNA tetraloop hairpin is less cooperative than its DNA counterpart.
    Moody EM; Feerrar JC; Bevilacqua PC
    Biochemistry; 2004 Jun; 43(25):7992-8. PubMed ID: 15209494
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Secondary structure prediction for aligned RNA sequences.
    Hofacker IL; Fekete M; Stadler PF
    J Mol Biol; 2002 Jun; 319(5):1059-66. PubMed ID: 12079347
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA.
    Schroeder SJ; Turner DH
    Biochemistry; 2000 Aug; 39(31):9257-74. PubMed ID: 10924119
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Isolation and characterization of a family of stable RNA tetraloops with the motif YNMG that participate in tertiary interactions.
    Proctor DJ; Schaak JE; Bevilacqua JM; Falzone CJ; Bevilacqua PC
    Biochemistry; 2002 Oct; 41(40):12062-75. PubMed ID: 12356306
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Effect of GCAA stabilizing loops on three- and four-way intramolecular junctions.
    Carr CE; Marky LA
    Phys Chem Chem Phys; 2018 Feb; 20(7):5046-5056. PubMed ID: 29388988
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Effects of non-nearest neighbors on the thermodynamic stability of RNA GNRA hairpin tetraloops.
    Vanegas PL; Horwitz TS; Znosko BM
    Biochemistry; 2012 Mar; 51(11):2192-8. PubMed ID: 22329761
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A computational approach to modeling nucleic acid hairpin structures.
    Tung CS
    Biophys J; 1997 Feb; 72(2 Pt 1):876-85. PubMed ID: 9017213
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.
    Pley HW; Flaherty KM; McKay DB
    Nature; 1994 Nov; 372(6501):111-3. PubMed ID: 7526219
    [TBL] [Abstract][Full Text] [Related]  

  • 20. RNA hairpin loop stability depends on closing base pair.
    Serra MJ; Lyttle MH; Axenson TJ; Schadt CA; Turner DH
    Nucleic Acids Res; 1993 Aug; 21(16):3845-9. PubMed ID: 7690127
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.