200 related articles for article (PubMed ID: 1422882)
1. Aligning two sequences within a specified diagonal band.
Chao KM; Pearson WR; Miller W
Comput Appl Biosci; 1992 Oct; 8(5):481-7. PubMed ID: 1422882
[TBL] [Abstract][Full Text] [Related]
2. Genomic multiple sequence alignments: refinement using a genetic algorithm.
Wang C; Lefkowitz EJ
BMC Bioinformatics; 2005 Aug; 6():200. PubMed ID: 16086841
[TBL] [Abstract][Full Text] [Related]
3. Introducing variable gap penalties to sequence alignment in linear space.
Thompson JD
Comput Appl Biosci; 1995 Apr; 11(2):181-6. PubMed ID: 7620991
[TBL] [Abstract][Full Text] [Related]
4. Dynamic programming algorithms for biological sequence comparison.
Pearson WR; Miller W
Methods Enzymol; 1992; 210():575-601. PubMed ID: 1584052
[TBL] [Abstract][Full Text] [Related]
5. Alignment of nucleotide or amino acid sequences on microcomputers, using a modification of Sellers' (1974) algorithm which avoids the need for calculation of the complete distance matrix.
Tyson H; Haley B
Comput Methods Programs Biomed; 1985 Oct; 21(1):3-10. PubMed ID: 3852712
[TBL] [Abstract][Full Text] [Related]
6. An adaptive and iterative algorithm for refining multiple sequence alignment.
Wang Y; Li KB
Comput Biol Chem; 2004 Apr; 28(2):141-8. PubMed ID: 15130542
[TBL] [Abstract][Full Text] [Related]
7. Analysing the performance of personal computers based on Intel microprocessors for sequence aligning bioinformatics applications.
Nair PS; John EB
Int J Bioinform Res Appl; 2007; 3(2):187-205. PubMed ID: 18048188
[TBL] [Abstract][Full Text] [Related]
8. Constrained multiple sequence alignment tool development and its application to RNase family alignment.
Tang CY; Lu CL; Chang MD; Tsai YT; Sun YJ; Chao KM; Chang JM; Chiou YH; Wu CM; Chang HT; Chou WI
Proc IEEE Comput Soc Bioinform Conf; 2002; 1():127-37. PubMed ID: 15838130
[TBL] [Abstract][Full Text] [Related]
9. A space-efficient algorithm for the constrained pairwise sequence alignment problem.
He D; Arslan AN
Genome Inform; 2005; 16(2):237-46. PubMed ID: 16901106
[TBL] [Abstract][Full Text] [Related]
10. Multiple DNA and protein sequence alignment based on segment-to-segment comparison.
Morgenstern B; Dress A; Werner T
Proc Natl Acad Sci U S A; 1996 Oct; 93(22):12098-103. PubMed ID: 8901539
[TBL] [Abstract][Full Text] [Related]
11. Reduced space sequence alignment.
Grice JA; Hughey R; Speck D
Comput Appl Biosci; 1997 Feb; 13(1):45-53. PubMed ID: 9088708
[TBL] [Abstract][Full Text] [Related]
12. Simulated annealing algorithm for the multiple sequence alignment problem: the approach of polymers in a random medium.
Hernández-Guía M; Mulet R; Rodríguez-Pérez S
Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Sep; 72(3 Pt 1):031915. PubMed ID: 16241490
[TBL] [Abstract][Full Text] [Related]
13. Searching protein sequence libraries: comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms.
Pearson WR
Genomics; 1991 Nov; 11(3):635-50. PubMed ID: 1774068
[TBL] [Abstract][Full Text] [Related]
14. Heuristics for multiobjective multiple sequence alignment.
Abbasi M; Paquete L; Pereira FB
Biomed Eng Online; 2016 Jul; 15 Suppl 1(Suppl 1):70. PubMed ID: 27454115
[TBL] [Abstract][Full Text] [Related]
15. Pattern matching of biological sequences with limited storage.
Gotoh O
Comput Appl Biosci; 1987 Mar; 3(1):17-20. PubMed ID: 3453210
[TBL] [Abstract][Full Text] [Related]
16. Recent developments in linear-space alignment methods: a survey.
Chao KM; Hardison RC; Miller W
J Comput Biol; 1994; 1(4):271-91. PubMed ID: 8790471
[TBL] [Abstract][Full Text] [Related]
17. Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices.
Streletc VB; Shindyalov IN; Kolchanov NA; Milanesi L
Comput Appl Biosci; 1992 Dec; 8(6):529-34. PubMed ID: 1468007
[TBL] [Abstract][Full Text] [Related]
18. A comprehensive comparison of multiple sequence alignment programs.
Thompson JD; Plewniak F; Poch O
Nucleic Acids Res; 1999 Jul; 27(13):2682-90. PubMed ID: 10373585
[TBL] [Abstract][Full Text] [Related]
19. Parametric alignment of ordered trees.
Wang L; Zhao J
Bioinformatics; 2003 Nov; 19(17):2237-45. PubMed ID: 14630652
[TBL] [Abstract][Full Text] [Related]
20. DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment.
Wright ES
BMC Bioinformatics; 2015 Oct; 16():322. PubMed ID: 26445311
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
