These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

176 related articles for article (PubMed ID: 14563874)

  • 1. Genome-scale analysis of the uses of the Escherichia coli genome: model-driven analysis of heterogeneous data sets.
    Allen TE; Herrgård MJ; Liu M; Qiu Y; Glasner JD; Blattner FR; Palsson BØ
    J Bacteriol; 2003 Nov; 185(21):6392-9. PubMed ID: 14563874
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-scale model of metabolism and gene expression provides a multi-scale description of acid stress responses in Escherichia coli.
    Du B; Yang L; Lloyd CJ; Fang X; Palsson BO
    PLoS Comput Biol; 2019 Dec; 15(12):e1007525. PubMed ID: 31809503
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Genomewide Stabilization of mRNA during a "Feast-to-Famine" Growth Transition in Escherichia coli.
    Morin M; Enjalbert B; Ropers D; Girbal L; Cocaign-Bousquet M
    mSphere; 2020 May; 5(3):. PubMed ID: 32434841
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media.
    Tao H; Bausch C; Richmond C; Blattner FR; Conway T
    J Bacteriol; 1999 Oct; 181(20):6425-40. PubMed ID: 10515934
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Transcriptional regulation in constraints-based metabolic models of Escherichia coli.
    Covert MW; Palsson BØ
    J Biol Chem; 2002 Aug; 277(31):28058-64. PubMed ID: 12006566
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Promoter addresses: revelations from oligonucleotide profiling applied to the Escherichia coli genome.
    Sivaraman K; Seshasayee AS; Swaminathan K; Muthukumaran G; Pennathur G
    Theor Biol Med Model; 2005 May; 2():20. PubMed ID: 15927055
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-wide localization of mobile elements: experimental, statistical and biological considerations.
    Martinez-Vaz BM; Xie Y; Pan W; Khodursky AB
    BMC Genomics; 2005 Jun; 6():81. PubMed ID: 15929794
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.
    Reed JL; Palsson BØ
    Genome Res; 2004 Sep; 14(9):1797-805. PubMed ID: 15342562
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Gene expression profiling of Escherichia coli expressing double Vitreoscilla haemoglobin.
    Roos V; Andersson CI; Bülow L
    J Biotechnol; 2004 Oct; 114(1-2):107-20. PubMed ID: 15464604
    [TBL] [Abstract][Full Text] [Related]  

  • 10. RNA expression analysis using a 30 base pair resolution Escherichia coli genome array.
    Selinger DW; Cheung KJ; Mei R; Johansson EM; Richmond CS; Blattner FR; Lockhart DJ; Church GM
    Nat Biotechnol; 2000 Dec; 18(12):1262-8. PubMed ID: 11101804
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities.
    Edwards JS; Palsson BO
    Proc Natl Acad Sci U S A; 2000 May; 97(10):5528-33. PubMed ID: 10805808
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli.
    Oshima T; Wada C; Kawagoe Y; Ara T; Maeda M; Masuda Y; Hiraga S; Mori H
    Mol Microbiol; 2002 Aug; 45(3):673-95. PubMed ID: 12139615
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR).
    Reed JL; Vo TD; Schilling CH; Palsson BO
    Genome Biol; 2003; 4(9):R54. PubMed ID: 12952533
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-scale analysis to the impact of gene deletion on the metabolism of E. coli: constraint-based simulation approach.
    Xu Z; Sun X; Yu S
    BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S62. PubMed ID: 19208166
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.
    Barrett CL; Herring CD; Reed JL; Palsson BO
    Proc Natl Acad Sci U S A; 2005 Dec; 102(52):19103-8. PubMed ID: 16357206
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Model-based redesign of global transcription regulation.
    Carrera J; Rodrigo G; Jaramillo A
    Nucleic Acids Res; 2009 Apr; 37(5):e38. PubMed ID: 19188257
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli.
    Hagiwara D; Sugiura M; Oshima T; Mori H; Aiba H; Yamashino T; Mizuno T
    J Bacteriol; 2003 Oct; 185(19):5735-46. PubMed ID: 13129944
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Decoding the nucleoid organisation of Bacillus subtilis and Escherichia coli through gene expression data.
    Carpentier AS; Torrésani B; Grossmann A; Hénaut A
    BMC Genomics; 2005 Jun; 6():84. PubMed ID: 15938745
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome-wide comparison of phage M13-infected vs. uninfected Escherichia coli.
    Karlsson F; Malmborg-Hager AC; Albrekt AS; Borrebaeck CA
    Can J Microbiol; 2005 Jan; 51(1):29-35. PubMed ID: 15782232
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Systematic analysis of conservation relations in Escherichia coli genome-scale metabolic network reveals novel growth media.
    Imielinski M; Belta C; Rubin H; Halász A
    Biophys J; 2006 Apr; 90(8):2659-72. PubMed ID: 16461408
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.