126 related articles for article (PubMed ID: 1457407)
1. Solution structure of the TnAn DNA duplex GCCGTTAACGCG containing the HpaI restriction site.
Kim SG; Reid BR
Biochemistry; 1992 Dec; 31(48):12103-16. PubMed ID: 1457407
[TBL] [Abstract][Full Text] [Related]
2. Determination of nucleic acid backbone conformation by 1H NMR.
Kim SG; Lin LJ; Reid BR
Biochemistry; 1992 Apr; 31(14):3564-74. PubMed ID: 1373647
[TBL] [Abstract][Full Text] [Related]
3. Structural effects of the C2-methylhypoxanthine:cytosine base pair in B-DNA: A combined NMR and X-ray diffraction study of d(CGC[m2I]AATTCGCG).
Yang D; Gao Y; Robinson H; van der Marel GA; van Boom JH; Wang AH
Biochemistry; 1993 Aug; 32(33):8672-81. PubMed ID: 8357809
[TBL] [Abstract][Full Text] [Related]
4. Determining local conformational variations in DNA. Nuclear magnetic resonance structures of the DNA duplexes d(CGCCTAATCG) and d(CGTCACGCGC) generated using back-calculation of the nuclear Overhauser effect spectra, a distance geometry algorithm and constrained molecular dynamics.
Metzler WJ; Wang C; Kitchen DB; Levy RM; Pardi A
J Mol Biol; 1990 Aug; 214(3):711-36. PubMed ID: 2167379
[TBL] [Abstract][Full Text] [Related]
5. Solution structure of [d(GCGTATACGC)]2.
Cheng JW; Chou SH; Salazar M; Reid BR
J Mol Biol; 1992 Nov; 228(1):118-37. PubMed ID: 1447776
[TBL] [Abstract][Full Text] [Related]
6. Three-dimensional solution structure of a DNA duplex containing the BclI restriction sequence: two-dimensional NMR studies, distance geometry calculations, and refinement by back-calculation of the NOESY spectrum.
Banks KM; Hare DR; Reid BR
Biochemistry; 1989 Aug; 28(17):6996-7010. PubMed ID: 2819044
[TBL] [Abstract][Full Text] [Related]
7. Investigation of solution structure of d(GAATTTAAATTC)2 by 1H NMR, molecular dynamics, mechanics, refinement by back-calculation of the NOESY spectrum and analysis of this structure using X-ray data.
Chuprina VP; Sletten E; Fedoroff OYu
J Biomol Struct Dyn; 1993 Feb; 10(4):693-707. PubMed ID: 8466674
[TBL] [Abstract][Full Text] [Related]
8. Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from two-dimensional NMR spectra.
Mujeeb A; Kerwin SM; Kenyon GL; James TL
Biochemistry; 1993 Dec; 32(49):13419-31. PubMed ID: 8257678
[TBL] [Abstract][Full Text] [Related]
9. The three-dimensional structure in solution (pH 5.8) of a DNA 9-mer duplex containing 1,N2-propanodeoxyguanosine opposite deoxyadenosine. Restrained molecular dynamics and NOE-based refinement calculations.
Huang P; Eisenberg M
Biochemistry; 1992 Jul; 31(28):6518-32. PubMed ID: 1633163
[TBL] [Abstract][Full Text] [Related]
10. Solution structure of a complex between [N-MeCys3,N-MeCys7]TANDEM and [d(GATATC)]2.
Addess KJ; Sinsheimer JS; Feigon J
Biochemistry; 1993 Mar; 32(10):2498-508. PubMed ID: 8448108
[TBL] [Abstract][Full Text] [Related]
11. Solution structure of the EcoRI DNA sequence: refinement of NMR-derived distance geometry structures by NOESY spectrum back-calculations.
Nerdal W; Hare DR; Reid BR
Biochemistry; 1989 Dec; 28(26):10008-21. PubMed ID: 2620059
[TBL] [Abstract][Full Text] [Related]
12. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
Cosman M; Hingerty BE; Luneva N; Amin S; Geacintov NE; Broyde S; Patel DJ
Biochemistry; 1996 Jul; 35(30):9850-63. PubMed ID: 8703959
[TBL] [Abstract][Full Text] [Related]
13. Metropolis Monte Carlo calculations of DNA structure using internal coordinates and NMR distance restraints: an alternative method for generating a high-resolution solution structure.
Ulyanov NB; Schmitz U; James TL
J Biomol NMR; 1993 Sep; 3(5):547-68. PubMed ID: 8219740
[TBL] [Abstract][Full Text] [Related]
14. Structure of DNA hexamer sequence d-CGATCG by two-dimensional nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
Barthwal R; Monica ; Awasthi P; Srivastava N; Sharma U; Kaur M; Govil G
J Biomol Struct Dyn; 2003 Dec; 21(3):407-23. PubMed ID: 14616036
[TBL] [Abstract][Full Text] [Related]
15. Solution structure of the conserved segment of the Myb cognate DNA sequence by 2D NMR, spectral simulation, restrained energy minimization, and distance geometry calculations.
Radha PK; Madan A; Nibedita R; Hosur RV
Biochemistry; 1995 May; 34(17):5913-22. PubMed ID: 7727449
[TBL] [Abstract][Full Text] [Related]
16. Solution conformation of [AF]dG opposite a -2 deletion site in a DNA duplex: intercalation of the covalently attached aminofluorene ring into the helix with base displacement of the C8-modified syn guanine and adjacent unpaired 3'-adenine into the major groove.
Mao B; Hingerty BE; Broyde S; Patel DJ
Biochemistry; 1995 Dec; 34(51):16641-53. PubMed ID: 8527437
[TBL] [Abstract][Full Text] [Related]
17. Systematic study of nuclear Overhauser effects vis-à-vis local helical parameters, sugar puckers, and glycosidic torsions in B DNA: insensitivity of NOE to local transitions in B DNA oligonucleotides due to internal structural compensations.
Ulyanov NB; Gorin AA; Zhurkin VB; Chen BC; Sarma MH; Sarma RH
Biochemistry; 1992 Apr; 31(16):3918-30. PubMed ID: 1567845
[TBL] [Abstract][Full Text] [Related]
18. Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations.
Weisz K; Shafer RH; Egan W; James TL
Biochemistry; 1994 Jan; 33(1):354-66. PubMed ID: 8286357
[TBL] [Abstract][Full Text] [Related]
19. DNA sequence GCGAATGAGC containing the human centromere core sequence GAAT forms a self-complementary duplex with sheared G.A pairs in solution.
Chou SH; Cheng JW; Fedoroff O; Reid BR
J Mol Biol; 1994 Aug; 241(3):467-79. PubMed ID: 8064859
[TBL] [Abstract][Full Text] [Related]
20. NMR solution structure of a DNA dodecamer containing single G.T mismatches.
Allawi HT; SantaLucia J
Nucleic Acids Res; 1998 Nov; 26(21):4925-34. PubMed ID: 9776755
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
