132 related articles for article (PubMed ID: 14597311)
1. Application of the S-score algorithm for analysis of oligonucleotide microarrays.
Kerns RT; Zhang L; Miles MF
Methods; 2003 Dec; 31(4):274-81. PubMed ID: 14597311
[TBL] [Abstract][Full Text] [Related]
2. A new algorithm for analysis of oligonucleotide arrays: application to expression profiling in mouse brain regions.
Zhang L; Wang L; Ravindranathan A; Miles MF
J Mol Biol; 2002 Mar; 317(2):225-35. PubMed ID: 11902839
[TBL] [Abstract][Full Text] [Related]
3. GCSscore: an R package for differential gene expression analysis in Affymetrix/Thermo-Fisher whole transcriptome microarrays.
Harris GM; Abbas S; Miles MF
BMC Genomics; 2021 Feb; 22(1):96. PubMed ID: 33522903
[TBL] [Abstract][Full Text] [Related]
4. Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.
Sásik R; Calvo E; Corbeil J
Bioinformatics; 2002 Dec; 18(12):1633-40. PubMed ID: 12490448
[TBL] [Abstract][Full Text] [Related]
5. Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.
Seo J; Bakay M; Chen YW; Hilmer S; Shneiderman B; Hoffman EP
Bioinformatics; 2004 Nov; 20(16):2534-44. PubMed ID: 15117752
[TBL] [Abstract][Full Text] [Related]
6. Long versus short oligonucleotide microarrays for the study of gene expression in nonhuman primates.
Walker SJ; Wang Y; Grant KA; Chan F; Hellmann GM
J Neurosci Methods; 2006 Apr; 152(1-2):179-89. PubMed ID: 16253343
[TBL] [Abstract][Full Text] [Related]
7. Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays.
Scacheri PC; Crawford GE; Davis S
Methods Enzymol; 2006; 411():270-82. PubMed ID: 16939795
[TBL] [Abstract][Full Text] [Related]
8. Probe Design Strategies for Oligonucleotide Microarrays.
Parisot N; Peyretaillade E; Dugat-Bony E; Denonfoux J; Mahul A; Peyret P
Methods Mol Biol; 2016; 1368():67-82. PubMed ID: 26614069
[TBL] [Abstract][Full Text] [Related]
9. Maximum significance clustering of oligonucleotide microarrays.
de Ridder D; Staal FJ; van Dongen JJ; Reinders MJ
Bioinformatics; 2006 Feb; 22(3):326-31. PubMed ID: 16303800
[TBL] [Abstract][Full Text] [Related]
10. Trends in the quality of data from 5168 oligonucleotide microarrays from a single facility.
Finkelstein DB
J Biomol Tech; 2005 Jun; 16(2):143-53. PubMed ID: 16030321
[TBL] [Abstract][Full Text] [Related]
11. Design and fabrication of spotted long oligonucleotide microarrays for gene expression analysis.
Chou CC; Peck K
Methods Mol Biol; 2007; 381():213-25. PubMed ID: 17984521
[TBL] [Abstract][Full Text] [Related]
12. Empirical validation of the S-Score algorithm in the analysis of gene expression data.
Kennedy RE; Archer KJ; Miles MF
BMC Bioinformatics; 2006 Mar; 7():154. PubMed ID: 16545131
[TBL] [Abstract][Full Text] [Related]
13. Noise reduction from genotyping microarrays using probe level information.
Komura D; Nishimura K; Ishikawa S; Panda B; Huang J; Nakamura H; Ihara S; Hirose M; Jones KW; Aburatani H
In Silico Biol; 2006; 6(1-2):79-92. PubMed ID: 16789916
[TBL] [Abstract][Full Text] [Related]
14. Comparative analysis of algorithms for signal quantitation from oligonucleotide microarrays.
Barash Y; Dehan E; Krupsky M; Franklin W; Geraci M; Friedman N; Kaminski N
Bioinformatics; 2004 Apr; 20(6):839-46. PubMed ID: 14751998
[TBL] [Abstract][Full Text] [Related]
15. A greedy algorithm for gene selection based on SVM and correlation.
Song M; Rajasekaran S
Int J Bioinform Res Appl; 2010; 6(3):296-307. PubMed ID: 20615837
[TBL] [Abstract][Full Text] [Related]
16. A simple method to improve probe set estimates from oligonucleotide arrays.
Lazaridis EN; Sinibaldi D; Bloom G; Mane S; Jove R
Math Biosci; 2002 Mar; 176(1):53-8. PubMed ID: 11867083
[TBL] [Abstract][Full Text] [Related]
17. Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays.
Auer H; Newsom DL; Nowak NJ; McHugh KM; Singh S; Yu CY; Yang Y; Wenger GD; Gastier-Foster JM; Kornacker K
BMC Genomics; 2007 Apr; 8():111. PubMed ID: 17470268
[TBL] [Abstract][Full Text] [Related]
18. Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy.
Hu G; Llinás M; Li J; Preiser PR; Bozdech Z
BMC Bioinformatics; 2007 Sep; 8():350. PubMed ID: 17880708
[TBL] [Abstract][Full Text] [Related]
19. Expression profiling using affymetrix genechip probe arrays.
Schinke-Braun M; Couget JA
Methods Mol Biol; 2007; 366():13-40. PubMed ID: 17568117
[TBL] [Abstract][Full Text] [Related]
20. Multiple testing and its applications to microarrays.
Ge Y; Sealfon SC; Speed TP
Stat Methods Med Res; 2009 Dec; 18(6):543-63. PubMed ID: 20048384
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
