BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

228 related articles for article (PubMed ID: 14602917)

  • 1. Deleterious mutation prediction in the secondary structure of RNAs.
    Barash D
    Nucleic Acids Res; 2003 Nov; 31(22):6578-84. PubMed ID: 14602917
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Second eigenvalue of the Laplacian matrix for predicting RNA conformational switch by mutation.
    Barash D
    Bioinformatics; 2004 Aug; 20(12):1861-9. PubMed ID: 14988109
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An efficient method for the prediction of deleterious multiple-point mutations in the secondary structure of RNAs using suboptimal folding solutions.
    Churkin A; Barash D
    BMC Bioinformatics; 2008 Apr; 9():222. PubMed ID: 18445289
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Prediction of alternative RNA secondary structures based on fluctuating thermodynamic parameters.
    Le SY; Chen JH; Maizel JV
    Nucleic Acids Res; 1993 May; 21(9):2173-8. PubMed ID: 7684834
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RNAmute: RNA secondary structure mutation analysis tool.
    Churkin A; Barash D
    BMC Bioinformatics; 2006 Apr; 7():221. PubMed ID: 16638137
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Mutational analysis in RNAs: comparing programs for RNA deleterious mutation prediction.
    Barash D; Churkin A
    Brief Bioinform; 2011 Mar; 12(2):104-14. PubMed ID: 21422070
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Sampled ensemble neutrality as a feature to classify potential structured RNAs.
    Pei S; Anthony JS; Meyer MM
    BMC Genomics; 2015 Feb; 16(1):35. PubMed ID: 25649229
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Spectral decomposition for the search and analysis of RNA secondary structure.
    Barash D
    J Comput Biol; 2004; 11(6):1169-74. PubMed ID: 15662204
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A tertiary structural element in S box leader RNAs is required for S-adenosylmethionine-directed transcription termination.
    McDaniel BA; Grundy FJ; Henkin TM
    Mol Microbiol; 2005 Aug; 57(4):1008-21. PubMed ID: 16091040
    [TBL] [Abstract][Full Text] [Related]  

  • 10. IndelsRNAmute: predicting deleterious multiple point substitutions and indels mutations.
    Churkin A; Ponty Y; Barash D
    BMC Bioinformatics; 2022 Oct; 23(Suppl 8):424. PubMed ID: 36241988
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Predicting common foldings of homologous RNAs.
    Le SY; Zuker M
    J Biomol Struct Dyn; 1991 Apr; 8(5):1027-44. PubMed ID: 1715169
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme.
    Shcherbakova I; Gupta S; Chance MR; Brenowitz M
    J Mol Biol; 2004 Oct; 342(5):1431-42. PubMed ID: 15364572
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RNA folding causes secondary structure rearrangement.
    Wu M; Tinoco I
    Proc Natl Acad Sci U S A; 1998 Sep; 95(20):11555-60. PubMed ID: 9751704
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Detection of common motifs in RNA secondary structures.
    Margalit H; Shapiro BA; Oppenheim AB; Maizel JV
    Nucleic Acids Res; 1989 Jun; 17(12):4829-45. PubMed ID: 2473442
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Efficient algorithms for probing the RNA mutation landscape.
    WaldispĆ¼hl J; Devadas S; Berger B; Clote P
    PLoS Comput Biol; 2008 Aug; 4(8):e1000124. PubMed ID: 18688270
    [TBL] [Abstract][Full Text] [Related]  

  • 16. STR2: a structure to string approach for locating G-box riboswitch shapes in pre-selected genes.
    Bergig O; Barash D; Nudler E; Kedem K
    In Silico Biol; 2004; 4(4):593-604. PubMed ID: 15752075
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dynamic programming algorithms for RNA structure prediction with binding sites.
    Poolsap U; Kato Y; Akutsu T
    Pac Symp Biocomput; 2010; ():98-107. PubMed ID: 19908362
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An RNA folding method capable of identifying pseudoknots and base triples.
    Tabaska JE; Cary RB; Gabow HN; Stormo GD
    Bioinformatics; 1998; 14(8):691-9. PubMed ID: 9789095
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Prediction of RNA secondary structure based on helical regions distribution.
    WuJu L; JiaJin W
    Bioinformatics; 1998; 14(8):700-6. PubMed ID: 9790689
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A general method for rapid and nondenaturing purification of RNAs.
    Kieft JS; Batey RT
    RNA; 2004 Jun; 10(6):988-95. PubMed ID: 15146082
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.