These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 14649289)

  • 1. More for less in structural genomics.
    Heger A; Holm L
    J Struct Funct Genomics; 2003; 4(2-3):57-66. PubMed ID: 14649289
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Accurate detection of very sparse sequence motifs.
    Heger A; Lappe M; Holm L
    J Comput Biol; 2004; 11(5):843-57. PubMed ID: 15700405
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Large-scale comparison of protein sequence alignment algorithms with structure alignments.
    Sauder JM; Arthur JW; Dunbrack RL
    Proteins; 2000 Jul; 40(1):6-22. PubMed ID: 10813826
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improving the quality of twilight-zone alignments.
    Jaroszewski L; Rychlewski L; Godzik A
    Protein Sci; 2000 Aug; 9(8):1487-96. PubMed ID: 10975570
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MUSTANG: a multiple structural alignment algorithm.
    Konagurthu AS; Whisstock JC; Stuckey PJ; Lesk AM
    Proteins; 2006 Aug; 64(3):559-74. PubMed ID: 16736488
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PASS2: an automated database of protein alignments organised as structural superfamilies.
    Bhaduri A; Pugalenthi G; Sowdhamini R
    BMC Bioinformatics; 2004 Apr; 5():35. PubMed ID: 15059245
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A practical and robust sequence search strategy for structural genomics target selection.
    Bray JE; Marsden RL; Rison SC; Savchenko A; Edwards AM; Thornton JM; Orengo CA
    Bioinformatics; 2004 Sep; 20(14):2288-95. PubMed ID: 15201178
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Accuracy of structure-based sequence alignment of automatic methods.
    Kim C; Lee B
    BMC Bioinformatics; 2007 Sep; 8():355. PubMed ID: 17883866
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Motif-based protein ranking by network propagation.
    Kuang R; Weston J; Noble WS; Leslie C
    Bioinformatics; 2005 Oct; 21(19):3711-8. PubMed ID: 16076885
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Towards optimal alignment of protein structure distance matrices.
    Wohlers I; Domingues FS; Klau GW
    Bioinformatics; 2010 Sep; 26(18):2273-80. PubMed ID: 20639543
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Within the twilight zone: a sensitive profile-profile comparison tool based on information theory.
    Yona G; Levitt M
    J Mol Biol; 2002 Feb; 315(5):1257-75. PubMed ID: 11827492
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.
    Kristensen DM; Ward RM; Lisewski AM; Erdin S; Chen BY; Fofanov VY; Kimmel M; Kavraki LE; Lichtarge O
    BMC Bioinformatics; 2008 Jan; 9():17. PubMed ID: 18190718
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A new progressive-iterative algorithm for multiple structure alignment.
    Lupyan D; Leo-Macias A; Ortiz AR
    Bioinformatics; 2005 Aug; 21(15):3255-63. PubMed ID: 15941743
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction.
    Scheeff ED; Bourne PE
    BMC Bioinformatics; 2006 Sep; 7():410. PubMed ID: 16970830
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An evaluation of automated homology modelling methods at low target template sequence similarity.
    Dalton JA; Jackson RM
    Bioinformatics; 2007 Aug; 23(15):1901-8. PubMed ID: 17510171
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Method for predicting homology modeling accuracy from amino acid sequence alignment: the power function.
    Iwadate M; Kanou K; Terashi G; Umeyama H; Takeda-Shitaka M
    Chem Pharm Bull (Tokyo); 2010 Jan; 58(1):1-10. PubMed ID: 20045957
    [TBL] [Abstract][Full Text] [Related]  

  • 18. HHalign-Kbest: exploring sub-optimal alignments for remote homology comparative modeling.
    Yu J; Picord G; Tuffery P; Guerois R
    Bioinformatics; 2015 Dec; 31(23):3850-2. PubMed ID: 26231431
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model.
    Neuwald AF; Liu JS
    BMC Bioinformatics; 2004 Oct; 5():157. PubMed ID: 15504234
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling.
    Meier A; Söding J
    PLoS Comput Biol; 2015 Oct; 11(10):e1004343. PubMed ID: 26496371
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.