BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

202 related articles for article (PubMed ID: 14659019)

  • 1. Comparing cDNA and oligonucleotide array data: concordance of gene expression across platforms for the NCI-60 cancer cells.
    Lee JK; Bussey KJ; Gwadry FG; Reinhold W; Riddick G; Pelletier SL; Nishizuka S; Szakacs G; Annereau JP; Shankavaram U; Lababidi S; Smith LH; Gottesman MM; Weinstein JN
    Genome Biol; 2003; 4(12):R82. PubMed ID: 14659019
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    Carter SL; Eklund AC; Mecham BH; Kohane IS; Szallasi Z
    BMC Bioinformatics; 2005 Apr; 6():107. PubMed ID: 15850491
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comparison of gene expression measurements from cDNA and 60-mer oligonucleotide microarrays.
    Zhu B; Ping G; Shinohara Y; Zhang Y; Baba Y
    Genomics; 2005 Jun; 85(6):657-65. PubMed ID: 15885493
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Three microarray platforms: an analysis of their concordance in profiling gene expression.
    Petersen D; Chandramouli GV; Geoghegan J; Hilburn J; Paarlberg J; Kim CH; Munroe D; Gangi L; Han J; Puri R; Staudt L; Weinstein J; Barrett JC; Green J; Kawasaki ES
    BMC Genomics; 2005 May; 6():63. PubMed ID: 15876355
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study.
    Shankavaram UT; Reinhold WC; Nishizuka S; Major S; Morita D; Chary KK; Reimers MA; Scherf U; Kahn A; Dolginow D; Cossman J; Kaldjian EP; Scudiero DA; Petricoin E; Liotta L; Lee JK; Weinstein JN
    Mol Cancer Ther; 2007 Mar; 6(3):820-32. PubMed ID: 17339364
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.
    Wang Y; Barbacioru C; Hyland F; Xiao W; Hunkapiller KL; Blake J; Chan F; Gonzalez C; Zhang L; Samaha RR
    BMC Genomics; 2006 Mar; 7():59. PubMed ID: 16551369
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Cross-platform comparison and visualisation of gene expression data using co-inertia analysis.
    Culhane AC; Perrière G; Higgins DG
    BMC Bioinformatics; 2003 Nov; 4():59. PubMed ID: 14633289
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Determination of genes related to gastrointestinal tract origin cancer cells using a cDNA microarray.
    Kim TM; Jeong HJ; Seo MY; Kim SC; Cho G; Park CH; Kim TS; Park KH; Chung HC; Rha SY
    Clin Cancer Res; 2005 Jan; 11(1):79-86. PubMed ID: 15671531
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Are data from different gene expression microarray platforms comparable?
    Järvinen AK; Hautaniemi S; Edgren H; Auvinen P; Saarela J; Kallioniemi OP; Monni O
    Genomics; 2004 Jun; 83(6):1164-8. PubMed ID: 15177569
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparison of the latest commercial short and long oligonucleotide microarray technologies.
    de Reyniès A; Geromin D; Cayuela JM; Petel F; Dessen P; Sigaux F; Rickman DS
    BMC Genomics; 2006 Mar; 7():51. PubMed ID: 16539734
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips.
    van Ruissen F; Ruijter JM; Schaaf GJ; Asgharnegad L; Zwijnenburg DA; Kool M; Baas F
    BMC Genomics; 2005 Jun; 6():91. PubMed ID: 15955238
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Independence and reproducibility across microarray platforms.
    Larkin JE; Frank BC; Gavras H; Sultana R; Quackenbush J
    Nat Methods; 2005 May; 2(5):337-44. PubMed ID: 15846360
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Gene expression levels assessed by oligonucleotide microarray analysis and quantitative real-time RT-PCR -- how well do they correlate?
    Dallas PB; Gottardo NG; Firth MJ; Beesley AH; Hoffmann K; Terry PA; Freitas JR; Boag JM; Cummings AJ; Kees UR
    BMC Genomics; 2005 Apr; 6():59. PubMed ID: 15854232
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Selection and validation of differentially expressed genes in head and neck cancer.
    Kuriakose MA; Chen WT; He ZM; Sikora AG; Zhang P; Zhang ZY; Qiu WL; Hsu DF; McMunn-Coffran C; Brown SM; Elango EM; Delacure MD; Chen FA
    Cell Mol Life Sci; 2004 Jun; 61(11):1372-83. PubMed ID: 15170515
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms.
    Barnes M; Freudenberg J; Thompson S; Aronow B; Pavlidis P
    Nucleic Acids Res; 2005; 33(18):5914-23. PubMed ID: 16237126
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparing the use of Affymetrix to spotted oligonucleotide microarrays using two retinal pigment epithelium cell lines.
    Rogojina AT; Orr WE; Song BK; Geisert EE
    Mol Vis; 2003 Oct; 9():482-96. PubMed ID: 14551534
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Semaphorin-plexin signalling genes associated with human breast tumourigenesis.
    Gabrovska PN; Smith RA; Tiang T; Weinstein SR; Haupt LM; Griffiths LR
    Gene; 2011 Dec; 489(2):63-9. PubMed ID: 21925246
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Cross platform microarray analysis for robust identification of differentially expressed genes.
    Bosotti R; Locatelli G; Healy S; Scacheri E; Sartori L; Mercurio C; Calogero R; Isacchi A
    BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S5. PubMed ID: 17430572
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Highly expressed genes in pancreatic ductal adenocarcinomas: a comprehensive characterization and comparison of the transcription profiles obtained from three major technologies.
    Iacobuzio-Donahue CA; Ashfaq R; Maitra A; Adsay NV; Shen-Ong GL; Berg K; Hollingsworth MA; Cameron JL; Yeo CJ; Kern SE; Goggins M; Hruban RH
    Cancer Res; 2003 Dec; 63(24):8614-22. PubMed ID: 14695172
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen.
    Amundson SA; Do KT; Vinikoor LC; Lee RA; Koch-Paiz CA; Ahn J; Reimers M; Chen Y; Scudiero DA; Weinstein JN; Trent JM; Bittner ML; Meltzer PS; Fornace AJ
    Cancer Res; 2008 Jan; 68(2):415-24. PubMed ID: 18199535
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.