These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
23. Visual annotation of the gene database. Wen J; Wang X; Kibbe W; Lin S; Lu H Annu Int Conf IEEE Eng Med Biol Soc; 2009; 2009():4175-7. PubMed ID: 19964623 [TBL] [Abstract][Full Text] [Related]
24. Gene3D: comprehensive structural and functional annotation of genomes. Yeats C; Lees J; Reid A; Kellam P; Martin N; Liu X; Orengo C Nucleic Acids Res; 2008 Jan; 36(Database issue):D414-8. PubMed ID: 18032434 [TBL] [Abstract][Full Text] [Related]
25. MODBASE, a database of annotated comparative protein structure models, and associated resources. Pieper U; Eswar N; Braberg H; Madhusudhan MS; Davis FP; Stuart AC; Mirkovic N; Rossi A; Marti-Renom MA; Fiser A; Webb B; Greenblatt D; Huang CC; Ferrin TE; Sali A Nucleic Acids Res; 2004 Jan; 32(Database issue):D217-22. PubMed ID: 14681398 [TBL] [Abstract][Full Text] [Related]
26. Gene3D: structural assignment for whole genes and genomes using the CATH domain structure database. Buchan DW; Shepherd AJ; Lee D; Pearl FM; Rison SC; Thornton JM; Orengo CA Genome Res; 2002 Mar; 12(3):503-14. PubMed ID: 11875040 [TBL] [Abstract][Full Text] [Related]
27. The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli. Sundararaj S; Guo A; Habibi-Nazhad B; Rouani M; Stothard P; Ellison M; Wishart DS Nucleic Acids Res; 2004 Jan; 32(Database issue):D293-5. PubMed ID: 14681416 [TBL] [Abstract][Full Text] [Related]
31. SUPFAM--a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes. Pandit SB; Gosar D; Abhiman S; Sujatha S; Dixit SS; Mhatre NS; Sowdhamini R; Srinivasan N Nucleic Acids Res; 2002 Jan; 30(1):289-93. PubMed ID: 11752317 [TBL] [Abstract][Full Text] [Related]
32. SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models. Aziz RK; Devoid S; Disz T; Edwards RA; Henry CS; Olsen GJ; Olson R; Overbeek R; Parrello B; Pusch GD; Stevens RL; Vonstein V; Xia F PLoS One; 2012; 7(10):e48053. PubMed ID: 23110173 [TBL] [Abstract][Full Text] [Related]
33. The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis. Pearl F; Todd A; Sillitoe I; Dibley M; Redfern O; Lewis T; Bennett C; Marsden R; Grant A; Lee D; Akpor A; Maibaum M; Harrison A; Dallman T; Reeves G; Diboun I; Addou S; Lise S; Johnston C; Sillero A; Thornton J; Orengo C Nucleic Acids Res; 2005 Jan; 33(Database issue):D247-51. PubMed ID: 15608188 [TBL] [Abstract][Full Text] [Related]
35. FragKB: structural and literature annotation resource of conserved peptide fragments and residues. Tendulkar AV; Krallinger M; de la Torre V; López G; Wangikar PP; Valencia A PLoS One; 2010 Mar; 5(3):e9679. PubMed ID: 20305778 [TBL] [Abstract][Full Text] [Related]
36. u-Genome: a database on genome design in unicellular genomes. Sakharkar KR; Chaturvedi I; Chow VT; Kwoh CK; Kangueane P; Sakharkar MK In Silico Biol; 2005; 5(5-6):611-5. PubMed ID: 16610139 [TBL] [Abstract][Full Text] [Related]
37. ORFer--retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files. Büssow K; Hoffmann S; Sievert V BMC Bioinformatics; 2002 Dec; 3():40. PubMed ID: 12493080 [TBL] [Abstract][Full Text] [Related]
38. MolliGen, a database dedicated to the comparative genomics of Mollicutes. Barré A; de Daruvar A; Blanchard A Nucleic Acids Res; 2004 Jan; 32(Database issue):D307-10. PubMed ID: 14681420 [TBL] [Abstract][Full Text] [Related]
39. CyanoBase: the cyanobacteria genome database update 2010. Nakao M; Okamoto S; Kohara M; Fujishiro T; Fujisawa T; Sato S; Tabata S; Kaneko T; Nakamura Y Nucleic Acids Res; 2010 Jan; 38(Database issue):D379-81. PubMed ID: 19880388 [TBL] [Abstract][Full Text] [Related]