370 related articles for article (PubMed ID: 15044233)
1. CEBS object model for systems biology data, SysBio-OM.
Xirasagar S; Gustafson S; Merrick BA; Tomer KB; Stasiewicz S; Chan DD; Yost KJ; Yates JR; Sumner S; Xiao N; Waters MD
Bioinformatics; 2004 Sep; 20(13):2004-15. PubMed ID: 15044233
[TBL] [Abstract][Full Text] [Related]
2. Chemical effects in biological systems (CEBS) object model for toxicology data, SysTox-OM: design and application.
Xirasagar S; Gustafson SF; Huang CC; Pan Q; Fostel J; Boyer P; Merrick BA; Tomer KB; Chan DD; Yost KJ; Choi D; Xiao N; Stasiewicz S; Bushel P; Waters MD
Bioinformatics; 2006 Apr; 22(7):874-82. PubMed ID: 16410321
[TBL] [Abstract][Full Text] [Related]
3. An object model and database for functional genomics.
Jones A; Hunt E; Wastling JM; Pizarro A; Stoeckert CJ
Bioinformatics; 2004 Jul; 20(10):1583-90. PubMed ID: 15145818
[TBL] [Abstract][Full Text] [Related]
4. The MGED Ontology: a resource for semantics-based description of microarray experiments.
Whetzel PL; Parkinson H; Causton HC; Fan L; Fostel J; Fragoso G; Game L; Heiskanen M; Morrison N; Rocca-Serra P; Sansone SA; Taylor C; White J; Stoeckert CJ
Bioinformatics; 2006 Apr; 22(7):866-73. PubMed ID: 16428806
[TBL] [Abstract][Full Text] [Related]
5. Systems toxicology and the Chemical Effects in Biological Systems (CEBS) knowledge base.
Waters M; Boorman G; Bushel P; Cunningham M; Irwin R; Merrick A; Olden K; Paules R; Selkirk J; Stasiewicz S; Weis B; Van Houten B; Walker N; Tennant R
EHP Toxicogenomics; 2003 Jan; 111(1T):15-28. PubMed ID: 12735106
[TBL] [Abstract][Full Text] [Related]
6. Cancer genomics object model: an object model for multiple functional genomics data for cancer research.
Park YR; Lee HW; Cho SB; Kim JH
Stud Health Technol Inform; 2007; 129(Pt 2):1235-9. PubMed ID: 17911912
[TBL] [Abstract][Full Text] [Related]
7. Chemical effects in biological systems--data dictionary (CEBS-DD): a compendium of terms for the capture and integration of biological study design description, conventional phenotypes, and 'omics data.
Fostel J; Choi D; Zwickl C; Morrison N; Rashid A; Hasan A; Bao W; Richard A; Tong W; Bushel PR; Brown R; Bruno M; Cunningham ML; Dix D; Eastin W; Frade C; Garcia A; Heinloth A; Irwin R; Madenspacher J; Merrick BA; Papoian T; Paules R; Rocca-Serra P; Sansone AS; Stevens J; Tomer K; Yang C; Waters M
Toxicol Sci; 2005 Dec; 88(2):585-601. PubMed ID: 16150882
[TBL] [Abstract][Full Text] [Related]
8. Enabling high-throughput data management for systems biology: the Bioinformatics Resource Manager.
Shah AR; Singhal M; Klicker KR; Stephan EG; Wiley HS; Waters KM
Bioinformatics; 2007 Apr; 23(7):906-9. PubMed ID: 17324940
[TBL] [Abstract][Full Text] [Related]
9. PathExpress: a web-based tool to identify relevant pathways in gene expression data.
Goffard N; Weiller G
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W176-81. PubMed ID: 17586825
[TBL] [Abstract][Full Text] [Related]
10. SPLASH: systematic proteomics laboratory analysis and storage hub.
Lo SL; You T; Lin Q; Joshi SB; Chung MC; Hew CL
Proteomics; 2006 Mar; 6(6):1758-69. PubMed ID: 16456885
[TBL] [Abstract][Full Text] [Related]
11. cPath: open source software for collecting, storing, and querying biological pathways.
Cerami EG; Bader GD; Gross BE; Sander C
BMC Bioinformatics; 2006 Nov; 7():497. PubMed ID: 17101041
[TBL] [Abstract][Full Text] [Related]
12. A query language for biological networks.
Leser U
Bioinformatics; 2005 Sep; 21 Suppl 2():ii33-9. PubMed ID: 16204121
[TBL] [Abstract][Full Text] [Related]
13. springScape: visualisation of microarray and contextual bioinformatic data using spring embedding and an 'information landscape'.
Ebbels TM; Buxton BF; Jones DT
Bioinformatics; 2006 Jul; 22(14):e99-107. PubMed ID: 16873528
[TBL] [Abstract][Full Text] [Related]
14. PROTEIOS: an open source proteomics initiative.
Gärdén P; Alm R; Häkkinen J
Bioinformatics; 2005 May; 21(9):2085-7. PubMed ID: 15691852
[TBL] [Abstract][Full Text] [Related]
15. The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data.
Häkkinen J; Vincic G; Månsson O; Wårell K; Levander F
J Proteome Res; 2009 Jun; 8(6):3037-43. PubMed ID: 19354269
[TBL] [Abstract][Full Text] [Related]
16. Online predicted human interaction database.
Brown KR; Jurisica I
Bioinformatics; 2005 May; 21(9):2076-82. PubMed ID: 15657099
[TBL] [Abstract][Full Text] [Related]
17. MILANO--custom annotation of microarray results using automatic literature searches.
Rubinstein R; Simon I
BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
[TBL] [Abstract][Full Text] [Related]
18. Data management and analysis for gene expression arrays.
Ermolaeva O; Rastogi M; Pruitt KD; Schuler GD; Bittner ML; Chen Y; Simon R; Meltzer P; Trent JM; Boguski MS
Nat Genet; 1998 Sep; 20(1):19-23. PubMed ID: 9731524
[TBL] [Abstract][Full Text] [Related]
19. Data integration and analysis of biological networks.
Kim TY; Kim HU; Lee SY
Curr Opin Biotechnol; 2010 Feb; 21(1):78-84. PubMed ID: 20138751
[TBL] [Abstract][Full Text] [Related]
20. Classification of information fusion methods in systems biology.
Synnergren J; Olsson B; Gamalielsson J
In Silico Biol; 2009; 9(3):65-76. PubMed ID: 19795566
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
