These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. Duplication is more common among laterally transferred genes than among indigenous genes. Hooper SD; Berg OG Genome Biol; 2003; 4(8):R48. PubMed ID: 12914657 [TBL] [Abstract][Full Text] [Related]
4. Phylogenetics and the cohesion of bacterial genomes. Daubin V; Moran NA; Ochman H Science; 2003 Aug; 301(5634):829-32. PubMed ID: 12907801 [TBL] [Abstract][Full Text] [Related]
5. Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction. Rückert C; Koch DJ; Rey DA; Albersmeier A; Mormann S; Pühler A; Kalinowski J BMC Genomics; 2005 Sep; 6():121. PubMed ID: 16159395 [TBL] [Abstract][Full Text] [Related]
6. Detecting Horizontal Gene Transfer between Closely Related Taxa. Adato O; Ninyo N; Gophna U; Snir S PLoS Comput Biol; 2015 Oct; 11(10):e1004408. PubMed ID: 26439115 [TBL] [Abstract][Full Text] [Related]
7. The role of horizontal gene transfer in the evolution of selected foodborne bacterial pathogens. Kelly BG; Vespermann A; Bolton DJ Food Chem Toxicol; 2009 May; 47(5):951-68. PubMed ID: 18420329 [TBL] [Abstract][Full Text] [Related]
8. RECOMBFLOW: a scientific workflow environment for Intragenomic Gene Conversion analysis in bacterial genomes, including the pathogen Streptococcus pyogenes. Alhiyafi J; Sabesan C; Lu S; Ram JL Int J Bioinform Res Appl; 2009; 5(1):1-19. PubMed ID: 19136361 [TBL] [Abstract][Full Text] [Related]
9. Limitations of compositional approach to identifying horizontally transferred genes. Wang B J Mol Evol; 2001 Sep; 53(3):244-50. PubMed ID: 11523011 [TBL] [Abstract][Full Text] [Related]
10. Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes. Ogura Y; Ooka T; Asadulghani ; Terajima J; Nougayrède JP; Kurokawa K; Tashiro K; Tobe T; Nakayama K; Kuhara S; Oswald E; Watanabe H; Hayashi T Genome Biol; 2007; 8(7):R138. PubMed ID: 17711596 [TBL] [Abstract][Full Text] [Related]
11. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm. Podell S; Gaasterland T; Allen EE BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280 [TBL] [Abstract][Full Text] [Related]
12. Gene fusions and gene duplications: relevance to genomic annotation and functional analysis. Serres MH; Riley M BMC Genomics; 2005 Mar; 6():33. PubMed ID: 15757509 [TBL] [Abstract][Full Text] [Related]
13. Origin and evolution of gene families in Bacteria and Archaea. Collins RE; Merz H; Higgs PG BMC Bioinformatics; 2011 Oct; 12 Suppl 9(Suppl 9):S14. PubMed ID: 22151831 [TBL] [Abstract][Full Text] [Related]
14. Genome evolution in major Escherichia coli O157:H7 lineages. Zhang Y; Laing C; Steele M; Ziebell K; Johnson R; Benson AK; Taboada E; Gannon VP BMC Genomics; 2007 May; 8():121. PubMed ID: 17506902 [TBL] [Abstract][Full Text] [Related]
15. Systematic overestimation of gene gain through false diagnosis of gene absence. Zhaxybayeva O; Nesbø CL; Doolittle WF Genome Biol; 2007; 8(2):402. PubMed ID: 17328791 [TBL] [Abstract][Full Text] [Related]
17. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria. Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745 [TBL] [Abstract][Full Text] [Related]
18. Intrastrain and interstrain genetic variation within a paralogous gene family in Chlamydia pneumoniae. Viratyosin W; Campbell LA; Kuo CC; Rockey DD BMC Microbiol; 2002 Dec; 2():38. PubMed ID: 12460455 [TBL] [Abstract][Full Text] [Related]
19. Evolution of a microbial nitrilase gene family: a comparative and environmental genomics study. Podar M; Eads JR; Richardson TH BMC Evol Biol; 2005 Aug; 5():42. PubMed ID: 16083508 [TBL] [Abstract][Full Text] [Related]
20. Physiological genomics of Escherichia coli protein families. Liang P; Labedan B; Riley M Physiol Genomics; 2002; 9(1):15-26. PubMed ID: 11948287 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]