These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

56 related articles for article (PubMed ID: 15103628)

  • 1. On the functional significance of electron density protein structure alignments.
    Constans P
    Proteins; 2004 May; 55(3):646-55. PubMed ID: 15103628
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DMAPS: a database of multiple alignments for protein structures.
    Guda C; Pal LR; Shindyalov IN
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D273-6. PubMed ID: 16381863
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Can descriptors of the electron density distribution help to distinguish functional groups?
    Burton J; Meurice N; Leherte L; Vercauteren DP
    J Chem Inf Model; 2008 Oct; 48(10):1974-83. PubMed ID: 18831545
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of structural similarity based on reduced dimensionality representations of protein structure.
    Albrecht B; Grant GH; Richards WG
    Protein Eng Des Sel; 2004 May; 17(5):425-32. PubMed ID: 15187225
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A graph spectral analysis of the structural similarity network of protein chains.
    Krishnadev O; Brinda KV; Vishveshwara S
    Proteins; 2005 Oct; 61(1):152-63. PubMed ID: 16080147
    [TBL] [Abstract][Full Text] [Related]  

  • 7. CAALIGN: a program for pairwise and multiple protein-structure alignment.
    Oldfield TJ
    Acta Crystallogr D Biol Crystallogr; 2007 Apr; 63(Pt 4):514-25. PubMed ID: 17372357
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detecting similarities among distant homologous proteins by comparison of domain flexibilities.
    Pandini A; Mauri G; Bordogna A; Bonati L
    Protein Eng Des Sel; 2007 Jun; 20(6):285-99. PubMed ID: 17573407
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Alternative alignments from comparison of protein structures.
    Shih ES; Hwang MJ
    Proteins; 2004 Aug; 56(3):519-27. PubMed ID: 15229884
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A simple topological representation of protein structure: implications for new, fast, and robust structural classification.
    Bostick DL; Shen M; Vaisman II
    Proteins; 2004 Aug; 56(3):487-501. PubMed ID: 15229882
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein structure prediction based on sequence similarity.
    Jaroszewski L
    Methods Mol Biol; 2009; 569():129-56. PubMed ID: 19623489
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Estimating quality of template-based protein models by alignment stability.
    Chen H; Kihara D
    Proteins; 2008 May; 71(3):1255-74. PubMed ID: 18041762
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Clustering of domains of functionally related enzymes in the interaction database PRECISE by the generation of primary sequence patterns.
    Landon MR; Lancia DR; Clodfelter KH; Vajda S
    J Mol Graph Model; 2006 May; 24(6):426-33. PubMed ID: 16221553
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Classification of proteins based on similarity of two-dimensional protein maps.
    Albrecht B; Grant GH; Sisu C; Richards WG
    Biophys Chem; 2008 Nov; 138(1-2):11-22. PubMed ID: 18814947
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Quantifying structure-function uncertainty: a graph theoretical exploration into the origins and limitations of protein annotation.
    Shakhnovich BE; Max Harvey J
    J Mol Biol; 2004 Apr; 337(4):933-49. PubMed ID: 15033362
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Functional annotation by sequence-weighted structure alignments: statistical analysis and case studies from the Protein 3000 structural genomics project in Japan.
    Standley DM; Toh H; Nakamura H
    Proteins; 2008 Sep; 72(4):1333-51. PubMed ID: 18384072
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A new progressive-iterative algorithm for multiple structure alignment.
    Lupyan D; Leo-Macias A; Ortiz AR
    Bioinformatics; 2005 Aug; 21(15):3255-63. PubMed ID: 15941743
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Connecting the protein structure universe by using sparse recurring fragments.
    Friedberg I; Godzik A
    Structure; 2005 Aug; 13(8):1213-24. PubMed ID: 16084393
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Assessment of the probabilities for evolutionary structural changes in protein folds.
    Viksna J; Gilbert D
    Bioinformatics; 2007 Apr; 23(7):832-41. PubMed ID: 17282999
    [TBL] [Abstract][Full Text] [Related]  

  • 20. FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments.
    Saini HK; Fischer D
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W499-502. PubMed ID: 17537819
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.