144 related articles for article (PubMed ID: 15120384)
61. Least and most powerful phylogenetic tests to elucidate the origin of the seed plants in the presence of conflicting signals under misspecified models.
Aris-Brosou S
Syst Biol; 2003 Dec; 52(6):781-93. PubMed ID: 14668117
[TBL] [Abstract][Full Text] [Related]
62. NJML: a hybrid algorithm for the neighbor-joining and maximum-likelihood methods.
Ota S; Li WH
Mol Biol Evol; 2000 Sep; 17(9):1401-9. PubMed ID: 10958856
[TBL] [Abstract][Full Text] [Related]
63. When do phylogenetic mixture models mimic other phylogenetic models?
Allman ES; Rhodes JA; Sullivant S
Syst Biol; 2012 Dec; 61(6):1049-59. PubMed ID: 22798332
[TBL] [Abstract][Full Text] [Related]
64. A structural EM algorithm for phylogenetic inference.
Friedman N; Ninio M; Pe'er I; Pupko T
J Comput Biol; 2002; 9(2):331-53. PubMed ID: 12015885
[TBL] [Abstract][Full Text] [Related]
65. Phylogenetic analysis in molecular evolutionary genetics.
Nei M
Annu Rev Genet; 1996; 30():371-403. PubMed ID: 8982459
[TBL] [Abstract][Full Text] [Related]
66. Molecular dating of phylogenies by likelihood methods: a comparison of models and a new information criterion.
Paradis E
Mol Phylogenet Evol; 2013 May; 67(2):436-44. PubMed ID: 23454091
[TBL] [Abstract][Full Text] [Related]
67. The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small.
Nei M; Kumar S; Takahashi K
Proc Natl Acad Sci U S A; 1998 Oct; 95(21):12390-7. PubMed ID: 9770497
[TBL] [Abstract][Full Text] [Related]
68. Maximum likelihood estimation of ordered multinomial parameters.
Jewell NP; Kalbfleisch JD
Biostatistics; 2004 Apr; 5(2):291-306. PubMed ID: 15054032
[TBL] [Abstract][Full Text] [Related]
69. Evaluation of Ancestral Sequence Reconstruction Methods to Infer Nonstationary Patterns of Nucleotide Substitution.
Matsumoto T; Akashi H; Yang Z
Genetics; 2015 Jul; 200(3):873-90. PubMed ID: 25948563
[TBL] [Abstract][Full Text] [Related]
70. A genetic algorithm for maximum-likelihood phylogeny inference using nucleotide sequence data.
Lewis PO
Mol Biol Evol; 1998 Mar; 15(3):277-83. PubMed ID: 9501494
[TBL] [Abstract][Full Text] [Related]
71. Efficient biased estimation of evolutionary distances when substitution rates vary across sites.
Guindon S; Gascuel O
Mol Biol Evol; 2002 Apr; 19(4):534-43. PubMed ID: 11919295
[TBL] [Abstract][Full Text] [Related]
72. Accuracies of ancestral amino acid sequences inferred by the parsimony, likelihood, and distance methods.
Zhang J; Nei M
J Mol Evol; 1997; 44 Suppl 1():S139-46. PubMed ID: 9071022
[TBL] [Abstract][Full Text] [Related]
73. Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit.
Brown JM
Syst Biol; 2014 May; 63(3):334-48. PubMed ID: 24415681
[TBL] [Abstract][Full Text] [Related]
74. Neighborhoods of trees in circular orderings.
Bastkowski S; Moulton V; Spillner A; Wu T
Bull Math Biol; 2015 Jan; 77(1):46-70. PubMed ID: 25477080
[TBL] [Abstract][Full Text] [Related]
75. Relative efficiencies of the maximum parsimony and distance-matrix methods in obtaining the correct phylogenetic tree.
Sourdis J; Nei M
Mol Biol Evol; 1988 May; 5(3):298-311. PubMed ID: 3386530
[TBL] [Abstract][Full Text] [Related]
76. Maximum likelihood estimator and likelihood ratio test in complex models: an application to B lymphocyte development.
Gorfine M; Freedman L; Shahaf G; Mehr R
Bull Math Biol; 2003 Nov; 65(6):1131-9. PubMed ID: 14607292
[TBL] [Abstract][Full Text] [Related]
77. A topological transformation in evolutionary tree search methods based on maximum likelihood combining p-ECR and neighbor joining.
Guo MZ; Li JF; Liu Y
BMC Bioinformatics; 2008 May; 9 Suppl 6(Suppl 6):S4. PubMed ID: 18541057
[TBL] [Abstract][Full Text] [Related]
78. Confidence regions and hypothesis tests for topologies using generalized least squares.
Susko E
Mol Biol Evol; 2003 Jun; 20(6):862-8. PubMed ID: 12716999
[TBL] [Abstract][Full Text] [Related]
79. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
Guindon S; Gascuel O
Syst Biol; 2003 Oct; 52(5):696-704. PubMed ID: 14530136
[TBL] [Abstract][Full Text] [Related]
80. Progressive tree neighborhood applied to the maximum parsimony problem.
Goƫffon A; Richer JM; Hao JK
IEEE/ACM Trans Comput Biol Bioinform; 2008; 5(1):136-45. PubMed ID: 18245882
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]