120 related articles for article (PubMed ID: 15177690)
1. Short-range compositional correlation in the yeast genome depends on transcriptional orientation.
Marín A; Wang M; Gutiérrez G
Gene; 2004 May; 333():151-5. PubMed ID: 15177690
[TBL] [Abstract][Full Text] [Related]
2. Paleogenomics or the search for remnant duplicated copies of the yeast DUP240 gene family in intergenic areas.
Wirth B; Louis VL; Potier S; Souciet JL; Despons L
Mol Biol Evol; 2005 Sep; 22(9):1764-71. PubMed ID: 15917500
[TBL] [Abstract][Full Text] [Related]
3. Relationship between G+C content, ORF-length and mRNA concentration in Saccharomyces cerevisiae.
Marín A; Gallardo M; Kato Y; Shirahige K; Gutiérrez G; Ohta K; Aguilera A
Yeast; 2003 Jun; 20(8):703-11. PubMed ID: 12794931
[TBL] [Abstract][Full Text] [Related]
4. Gene relics in the genome of the yeast Saccharomyces cerevisiae.
Lafontaine I; Fischer G; Talla E; Dujon B
Gene; 2004 Jun; 335():1-17. PubMed ID: 15194185
[TBL] [Abstract][Full Text] [Related]
5. Total number of coding open reading frames in the yeast genome.
Kowalczuk M; Mackiewicz P; Gierlik A; Dudek MR; Cebrat S
Yeast; 1999 Aug; 15(11):1031-4. PubMed ID: 10455227
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions.
Zhu X; Wirén M; Sinha I; Rasmussen NN; Linder T; Holmberg S; Ekwall K; Gustafsson CM
Mol Cell; 2006 Apr; 22(2):169-78. PubMed ID: 16630887
[TBL] [Abstract][Full Text] [Related]
7. Reorganization of adjacent gene relationships in yeast genomes by whole-genome duplication and gene deletion.
Byrnes JK; Morris GP; Li WH
Mol Biol Evol; 2006 Jun; 23(6):1136-43. PubMed ID: 16527865
[TBL] [Abstract][Full Text] [Related]
8. Evolutionary footprints of nucleosome positions in yeast.
Washietl S; Machné R; Goldman N
Trends Genet; 2008 Dec; 24(12):583-7. PubMed ID: 18951646
[TBL] [Abstract][Full Text] [Related]
9. Genome-scale identification of nucleosome positions in S. cerevisiae.
Yuan GC; Liu YJ; Dion MF; Slack MD; Wu LF; Altschuler SJ; Rando OJ
Science; 2005 Jul; 309(5734):626-30. PubMed ID: 15961632
[TBL] [Abstract][Full Text] [Related]
10. Analyzing gene expression from relative codon usage bias in Yeast genome: a statistical significance and biological relevance.
Das S; Roymondal U; Sahoo S
Gene; 2009 Aug; 443(1-2):121-31. PubMed ID: 19410638
[TBL] [Abstract][Full Text] [Related]
11. An extensive analysis on the global codon usage pattern of baculoviruses.
Jiang Y; Deng F; Wang H; Hu Z
Arch Virol; 2008; 153(12):2273-82. PubMed ID: 19030954
[TBL] [Abstract][Full Text] [Related]
12. Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.
Cvijović M; Dalevi D; Bilsland E; Kemp GJ; Sunnerhagen P
BMC Bioinformatics; 2007 Aug; 8():295. PubMed ID: 17686169
[TBL] [Abstract][Full Text] [Related]
13. Ectopic gene conversions increase the G + C content of duplicated yeast and Arabidopsis genes.
Benovoy D; Morris RT; Morin A; Drouin G
Mol Biol Evol; 2005 Sep; 22(9):1865-8. PubMed ID: 15917495
[TBL] [Abstract][Full Text] [Related]
14. A genomic study of the inter-ORF distances in Saccharomyces cerevisiae.
Pelechano V; García-Martínez J; Pérez-Ortín JE
Yeast; 2006 Jul; 23(9):689-99. PubMed ID: 16845687
[TBL] [Abstract][Full Text] [Related]
15. Analysis of codon usage bias and base compositional constraints in iridovirus genomes.
Tsai CT; Lin CH; Chang CY
Virus Res; 2007 Jun; 126(1-2):196-206. PubMed ID: 17434639
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiae.
Hurowitz EH; Brown PO
Genome Biol; 2003; 5(1):R2. PubMed ID: 14709174
[TBL] [Abstract][Full Text] [Related]
17. The consequences of base pair composition biases for regulatory network organization in prokaryotes.
Cordero OX; Hogeweg P
Mol Biol Evol; 2009 Oct; 26(10):2171-3. PubMed ID: 19567917
[TBL] [Abstract][Full Text] [Related]
18. Annotation of unknown yeast ORFs by correlation analysis of microarray data and extensive literature searches.
Pir P; Ulgen KO; Hayes A; Ilsen Onsan Z; Kirdar B; Oliver SG
Yeast; 2006 May; 23(7):553-71. PubMed ID: 16710832
[TBL] [Abstract][Full Text] [Related]
19. Compositional correlation between open reading frames with opposite transcriptional orientations in Escherichia coli.
Marín A; Gutiérrez G; Oliver JL
J Mol Evol; 1999 Jun; 48(6):712-6. PubMed ID: 10229575
[TBL] [Abstract][Full Text] [Related]
20. Disruption and phenotypic analysis of seven ORFs from the left arm of chromosome XV of Saccharomyces cerevisiae.
Hajji K; Clotet J; Ariño J
Yeast; 1999 Mar; 15(5):435-41. PubMed ID: 10220002
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
