These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 15199174)

  • 1. RNAProfile: an algorithm for finding conserved secondary structure motifs in unaligned RNA sequences.
    Pavesi G; Mauri G; Stefani M; Pesole G
    Nucleic Acids Res; 2004; 32(10):3258-69. PubMed ID: 15199174
    [TBL] [Abstract][Full Text] [Related]  

  • 2. De novo secondary structure motif discovery using RNAProfile.
    Zambelli F; Pavesi G
    Methods Mol Biol; 2015; 1269():49-62. PubMed ID: 25577372
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences.
    Ji Y; Xu X; Stormo GD
    Bioinformatics; 2004 Jul; 20(10):1591-602. PubMed ID: 14962926
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes.
    Pavesi G; Mereghetti P; Zambelli F; Stefani M; Mauri G; Pesole G
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W566-70. PubMed ID: 16845071
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Identification of consensus RNA secondary structures using suffix arrays.
    Anwar M; Nguyen T; Turcotte M
    BMC Bioinformatics; 2006 May; 7():244. PubMed ID: 16677380
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A method for aligning RNA secondary structures and its application to RNA motif detection.
    Liu J; Wang JT; Hu J; Tian B
    BMC Bioinformatics; 2005 Apr; 6():89. PubMed ID: 15817128
    [TBL] [Abstract][Full Text] [Related]  

  • 7. New mammalian selenocysteine-containing proteins identified with an algorithm that searches for selenocysteine insertion sequence elements.
    Kryukov GV; Kryukov VM; Gladyshev VN
    J Biol Chem; 1999 Nov; 274(48):33888-97. PubMed ID: 10567350
    [TBL] [Abstract][Full Text] [Related]  

  • 8. New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes.
    Parker BJ; Moltke I; Roth A; Washietl S; Wen J; Kellis M; Breaker R; Pedersen JS
    Genome Res; 2011 Nov; 21(11):1929-43. PubMed ID: 21994249
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Two distinct SECIS structures capable of directing selenocysteine incorporation in eukaryotes.
    Grundner-Culemann E; Martin GW; Harney JW; Berry MJ
    RNA; 1999 May; 5(5):625-35. PubMed ID: 10334333
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural analysis of new local features in SECIS RNA hairpins.
    Fagegaltier D; Lescure A; Walczak R; Carbon P; Krol A
    Nucleic Acids Res; 2000 Jul; 28(14):2679-89. PubMed ID: 10908323
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Discovering common stem-loop motifs in unaligned RNA sequences.
    Gorodkin J; Stricklin SL; Stormo GD
    Nucleic Acids Res; 2001 May; 29(10):2135-44. PubMed ID: 11353083
    [TBL] [Abstract][Full Text] [Related]  

  • 12. TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences.
    Harmanci AO; Sharma G; Mathews DH
    BMC Bioinformatics; 2011 Apr; 12():108. PubMed ID: 21507242
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures.
    Gruber AR; Neuböck R; Hofacker IL; Washietl S
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W335-8. PubMed ID: 17452347
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Bayesian sampling of evolutionarily conserved RNA secondary structures with pseudoknots.
    Doose G; Metzler D
    Bioinformatics; 2012 Sep; 28(17):2242-8. PubMed ID: 22796961
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs.
    Walczak R; Westhof E; Carbon P; Krol A
    RNA; 1996 Apr; 2(4):367-79. PubMed ID: 8634917
    [TBL] [Abstract][Full Text] [Related]  

  • 16. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Xu X; Ji Y; Stormo GD
    Bioinformatics; 2007 Aug; 23(15):1883-91. PubMed ID: 17537756
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines.
    Xu X; Ji Y; Stormo GD
    PLoS Comput Biol; 2009 Apr; 5(4):e1000338. PubMed ID: 19343219
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Pairwise RNA secondary structure alignment with conserved stem pattern.
    Chiu JK; Chen YP
    Bioinformatics; 2015 Dec; 31(24):3914-21. PubMed ID: 26275897
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The 3'-untranslated region of human type 2 iodothyronine deiodinase mRNA contains a functional selenocysteine insertion sequence element.
    Buettner C; Harney JW; Larsen PR
    J Biol Chem; 1998 Dec; 273(50):33374-8. PubMed ID: 9837913
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evolutionarily divergent spliceosomal snRNAs and a conserved non-coding RNA processing motif in Giardia lamblia.
    Hudson AJ; Moore AN; Elniski D; Joseph J; Yee J; Russell AG
    Nucleic Acids Res; 2012 Nov; 40(21):10995-1008. PubMed ID: 23019220
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.