These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 15215359)

  • 1. CE-MC: a multiple protein structure alignment server.
    Guda C; Lu S; Scheeff ED; Bourne PE; Shindyalov IN
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W100-3. PubMed ID: 15215359
    [TBL] [Abstract][Full Text] [Related]  

  • 2. DMAPS: a database of multiple alignments for protein structures.
    Guda C; Pal LR; Shindyalov IN
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D273-6. PubMed ID: 16381863
    [TBL] [Abstract][Full Text] [Related]  

  • 3. 3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment.
    Poirot O; Suhre K; Abergel C; O'Toole E; Notredame C
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W37-40. PubMed ID: 15215345
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MUSTANG: a multiple structural alignment algorithm.
    Konagurthu AS; Whisstock JC; Stuckey PJ; Lesk AM
    Proteins; 2006 Aug; 64(3):559-74. PubMed ID: 16736488
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm.
    Shindyalov IN; Bourne PE
    Nucleic Acids Res; 2001 Jan; 29(1):228-9. PubMed ID: 11125099
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SuperPose: a simple server for sophisticated structural superposition.
    Maiti R; Van Domselaar GH; Zhang H; Wishart DS
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W590-4. PubMed ID: 15215457
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
    Ferrè F; Ponty Y; Lorenz WA; Clote P
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W659-68. PubMed ID: 17567620
    [TBL] [Abstract][Full Text] [Related]  

  • 8. STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins.
    Heinig M; Frishman D
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W500-2. PubMed ID: 15215436
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee.
    Armougom F; Moretti S; Poirot O; Audic S; Dumas P; Schaeli B; Keduas V; Notredame C
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W604-8. PubMed ID: 16845081
    [TBL] [Abstract][Full Text] [Related]  

  • 10. FATCAT: a web server for flexible structure comparison and structure similarity searching.
    Ye Y; Godzik A
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W582-5. PubMed ID: 15215455
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CAALIGN: a program for pairwise and multiple protein-structure alignment.
    Oldfield TJ
    Acta Crystallogr D Biol Crystallogr; 2007 Apr; 63(Pt 4):514-25. PubMed ID: 17372357
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
    Havgaard JH; Lyngsø RB; Gorodkin J
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path.
    Shindyalov IN; Bourne PE
    Protein Eng; 1998 Sep; 11(9):739-47. PubMed ID: 9796821
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MATRAS: A program for protein 3D structure comparison.
    Kawabata T
    Nucleic Acids Res; 2003 Jul; 31(13):3367-9. PubMed ID: 12824329
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Toward high-throughput, multicriteria protein-structure comparison and analysis.
    Shah AA; Folino G; Krasnogor N
    IEEE Trans Nanobioscience; 2010 Jun; 9(2):144-55. PubMed ID: 20650704
    [TBL] [Abstract][Full Text] [Related]  

  • 16. mulPBA: an efficient multiple protein structure alignment method based on a structural alphabet.
    Léonard S; Joseph AP; Srinivasan N; Gelly JC; de Brevern AG
    J Biomol Struct Dyn; 2014 Apr; 32(4):661-8. PubMed ID: 23659291
    [TBL] [Abstract][Full Text] [Related]  

  • 17. iMolTalk: an interactive, internet-based protein structure analysis server.
    Diemand AV; Scheib H
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W512-6. PubMed ID: 15215439
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An alternative view of protein fold space.
    Shindyalov IN; Bourne PE
    Proteins; 2000 Feb; 38(3):247-60. PubMed ID: 10713986
    [TBL] [Abstract][Full Text] [Related]  

  • 19. MultiSETTER: web server for multiple RNA structure comparison.
    Čech P; Hoksza D; Svozil D
    BMC Bioinformatics; 2015 Aug; 16():253. PubMed ID: 26264783
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SledgeHMMER: a web server for batch searching the Pfam database.
    Chukkapalli G; Guda C; Subramaniam S
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W542-4. PubMed ID: 15215445
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.