These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

256 related articles for article (PubMed ID: 15215365)

  • 1. siRNA Selection Server: an automated siRNA oligonucleotide prediction server.
    Yuan B; Latek R; Hossbach M; Tuschl T; Lewitter F
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W130-4. PubMed ID: 15215365
    [TBL] [Abstract][Full Text] [Related]  

  • 2. dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference.
    Naito Y; Yamada T; Matsumiya T; Ui-Tei K; Saigo K; Morishita S
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W589-91. PubMed ID: 15980542
    [TBL] [Abstract][Full Text] [Related]  

  • 3. RFRCDB-siRNA: improved design of siRNAs by random forest regression model coupled with database searching.
    Jiang P; Wu H; Da Y; Sang F; Wei J; Sun X; Lu Z
    Comput Methods Programs Biomed; 2007 Sep; 87(3):230-8. PubMed ID: 17644215
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improved and automated prediction of effective siRNA.
    Chalk AM; Wahlestedt C; Sonnhammer EL
    Biochem Biophys Res Commun; 2004 Jun; 319(1):264-74. PubMed ID: 15158471
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Development of a software tool and criteria evaluation for efficient design of small interfering RNA.
    Chaudhary A; Srivastava S; Garg S
    Biochem Biophys Res Commun; 2011 Jan; 404(1):313-20. PubMed ID: 21145307
    [TBL] [Abstract][Full Text] [Related]  

  • 6. siRNAdb: a database of siRNA sequences.
    Chalk AM; Warfinge RE; Georgii-Hemming P; Sonnhammer EL
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D131-4. PubMed ID: 15608162
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DEQOR: a web-based tool for the design and quality control of siRNAs.
    Henschel A; Buchholz F; Habermann B
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W113-20. PubMed ID: 15215362
    [TBL] [Abstract][Full Text] [Related]  

  • 8. siDRM: an effective and generally applicable online siRNA design tool.
    Gong W; Ren Y; Zhou H; Wang Y; Kang S; Li T
    Bioinformatics; 2008 Oct; 24(20):2405-6. PubMed ID: 18718944
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sfold web server for statistical folding and rational design of nucleic acids.
    Ding Y; Chan CY; Lawrence CE
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W135-41. PubMed ID: 15215366
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A structure-activity relationship study of siRNAs with structural variations.
    Chang CI; Hong SW; Kim S; Lee DK
    Biochem Biophys Res Commun; 2007 Aug; 359(4):997-1003. PubMed ID: 17577577
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Designing effective siRNAs with off-target control.
    Snøve O; Nedland M; Fjeldstad SH; Humberset H; Birkeland OR; Grünfeld T; Saetrom P
    Biochem Biophys Res Commun; 2004 Dec; 325(3):769-73. PubMed ID: 15541356
    [TBL] [Abstract][Full Text] [Related]  

  • 12. siVirus: web-based antiviral siRNA design software for highly divergent viral sequences.
    Naito Y; Ui-Tei K; Nishikawa T; Takebe Y; Saigo K
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W448-50. PubMed ID: 16845046
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
    de Almeida RS; Keita D; Libeau G; Albina E
    Antiviral Res; 2008 Jul; 79(1):37-48. PubMed ID: 18394725
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A protocol for designing siRNAs with high functionality and specificity.
    Birmingham A; Anderson E; Sullivan K; Reynolds A; Boese Q; Leake D; Karpilow J; Khvorova A
    Nat Protoc; 2007; 2(9):2068-78. PubMed ID: 17853862
    [TBL] [Abstract][Full Text] [Related]  

  • 15. piRNABank: a web resource on classified and clustered Piwi-interacting RNAs.
    Sai Lakshmi S; Agrawal S
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D173-7. PubMed ID: 17881367
    [TBL] [Abstract][Full Text] [Related]  

  • 16. OligoWalk: an online siRNA design tool utilizing hybridization thermodynamics.
    Lu ZJ; Mathews DH
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W104-8. PubMed ID: 18490376
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Designing functional siRNA with reduced off-target effects.
    Naito Y; Ui-Tei K
    Methods Mol Biol; 2013; 942():57-68. PubMed ID: 23027045
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Toxicogenomics of non-viral drug delivery systems for RNAi: potential impact on siRNA-mediated gene silencing activity and specificity.
    Akhtar S; Benter I
    Adv Drug Deliv Rev; 2007 Mar; 59(2-3):164-82. PubMed ID: 17481774
    [TBL] [Abstract][Full Text] [Related]  

  • 19. OligoMatcher: analysis and selection of specific oligonucleotide sequences for gene silencing by antisense or siRNA.
    Mamidipalli S; Palakal M; Li S
    Appl Bioinformatics; 2006; 5(2):121-4. PubMed ID: 16722778
    [TBL] [Abstract][Full Text] [Related]  

  • 20. siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference.
    Naito Y; Yamada T; Ui-Tei K; Morishita S; Saigo K
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W124-9. PubMed ID: 15215364
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.