BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

107 related articles for article (PubMed ID: 15215371)

  • 1. The ERPIN server: an interface to profile-based RNA motif identification.
    Lambert A; Fontaine JF; Legendre M; Leclerc F; Permal E; Major F; Putzer H; Delfour O; Michot B; Gautheret D
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W160-5. PubMed ID: 15215371
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search.
    Havgaard JH; Lyngsø RB; Gorodkin J
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W650-3. PubMed ID: 15980555
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Direct RNA motif definition and identification from multiple sequence alignments using secondary structure profiles.
    Gautheret D; Lambert A
    J Mol Biol; 2001 Nov; 313(5):1003-11. PubMed ID: 11700055
    [TBL] [Abstract][Full Text] [Related]  

  • 4. MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes.
    Pavesi G; Mereghetti P; Zambelli F; Stefani M; Mauri G; Pesole G
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W566-70. PubMed ID: 16845071
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RegRNA: an integrated web server for identifying regulatory RNA motifs and elements.
    Huang HY; Chien CH; Jen KH; Huang HD
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W429-34. PubMed ID: 16845041
    [TBL] [Abstract][Full Text] [Related]  

  • 6. FAN: fingerprint analysis of nucleotide sequences.
    Maudling N; Attwood TK
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W620-3. PubMed ID: 15215463
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences.
    Scaria V; Hariharan M; Arora A; Maiti S
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W683-5. PubMed ID: 16845097
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RNAMST: efficient and flexible approach for identifying RNA structural homologs.
    Chang TH; Huang HD; Chuang TN; Shien DM; Horng JT
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W423-8. PubMed ID: 16845040
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computing expectation values for RNA motifs using discrete convolutions.
    Lambert A; Legendre M; Fontaine JF; Gautheret D
    BMC Bioinformatics; 2005 May; 6():118. PubMed ID: 15892887
    [TBL] [Abstract][Full Text] [Related]  

  • 10. YASS: enhancing the sensitivity of DNA similarity search.
    Noé L; Kucherov G
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W540-3. PubMed ID: 15980530
    [TBL] [Abstract][Full Text] [Related]  

  • 11. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
    Busch A; Backofen R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
    [TBL] [Abstract][Full Text] [Related]  

  • 12. QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
    Kikin O; D'Antonio L; Bagga PS
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W676-82. PubMed ID: 16845096
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A dedicated computational approach for the identification of archaeal H/ACA sRNAs.
    Muller S; Charpentier B; Branlant C; Leclerc F
    Methods Enzymol; 2007; 425():355-87. PubMed ID: 17673091
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Riboswitch finder--a tool for identification of riboswitch RNAs.
    Bengert P; Dandekar T
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W154-9. PubMed ID: 15215370
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNAbor: a web server for RNA structural neighbors.
    Freyhult E; Moulton V; Clote P
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W305-9. PubMed ID: 17526527
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Murlet: a practical multiple alignment tool for structural RNA sequences.
    Kiryu H; Tabei Y; Kin T; Asai K
    Bioinformatics; 2007 Jul; 23(13):1588-98. PubMed ID: 17459961
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Locomotif: from graphical motif description to RNA motif search.
    Reeder J; Reeder J; Giegerich R
    Bioinformatics; 2007 Jul; 23(13):i392-400. PubMed ID: 17646322
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Tracembler--software for in-silico chromosome walking in unassembled genomes.
    Dong Q; Wilkerson MD; Brendel V
    BMC Bioinformatics; 2007 May; 8():151. PubMed ID: 17490482
    [TBL] [Abstract][Full Text] [Related]  

  • 19. MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs.
    Kato M; Tsunoda T
    BMC Bioinformatics; 2007 Mar; 8():100. PubMed ID: 17378935
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.