BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

153 related articles for article (PubMed ID: 15215423)

  • 1. SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins.
    Kalinina OV; Novichkov PS; Mironov AA; Gelfand MS; Rakhmaninova AB
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W424-8. PubMed ID: 15215423
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
    Pei J; Cai W; Kinch LN; Grishin NV
    Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
    [TBL] [Abstract][Full Text] [Related]  

  • 3. [Computational method for prediction of protein functional sites using specificity determinants].
    Kalinina OV; Rassel RB; Rakhmaninova AB; Gel'fand MS
    Mol Biol (Mosk); 2007; 41(1):151-62. PubMed ID: 17380902
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PROMALS: towards accurate multiple sequence alignments of distantly related proteins.
    Pei J; Grishin NV
    Bioinformatics; 2007 Apr; 23(7):802-8. PubMed ID: 17267437
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Subfamily logos: visualization of sequence deviations at alignment positions with high information content.
    Beitz E
    BMC Bioinformatics; 2006 Jun; 7():313. PubMed ID: 16790056
    [TBL] [Abstract][Full Text] [Related]  

  • 6. BiasViz: visualization of amino acid biased regions in protein alignments.
    Huska MR; Buschmann H; Andrade-Navarro MA
    Bioinformatics; 2007 Nov; 23(22):3093-4. PubMed ID: 17921493
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
    Raghava GP; Han JH
    BMC Bioinformatics; 2005 Mar; 6():59. PubMed ID: 15773999
    [TBL] [Abstract][Full Text] [Related]  

  • 8. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR
    BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SSEP-Domain: protein domain prediction by alignment of secondary structure elements and profiles.
    Gewehr JE; Zimmer R
    Bioinformatics; 2006 Jan; 22(2):181-7. PubMed ID: 16267083
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A web-based program for the prediction of average hydropathy, average amphipathicity and average similarity of multiply aligned homologous proteins.
    Zhai Y; Saier MH
    J Mol Microbiol Biotechnol; 2001 Apr; 3(2):285-6. PubMed ID: 11321584
    [TBL] [Abstract][Full Text] [Related]  

  • 11. HCPM--program for hierarchical clustering of protein models.
    Gront D; Kolinski A
    Bioinformatics; 2005 Jul; 21(14):3179-80. PubMed ID: 15840705
    [TBL] [Abstract][Full Text] [Related]  

  • 12. FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments.
    Saini HK; Fischer D
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W499-502. PubMed ID: 17537819
    [TBL] [Abstract][Full Text] [Related]  

  • 13. FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded.
    Prilusky J; Felder CE; Zeev-Ben-Mordehai T; Rydberg EH; Man O; Beckmann JS; Silman I; Sussman JL
    Bioinformatics; 2005 Aug; 21(16):3435-8. PubMed ID: 15955783
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A new progressive-iterative algorithm for multiple structure alignment.
    Lupyan D; Leo-Macias A; Ortiz AR
    Bioinformatics; 2005 Aug; 21(15):3255-63. PubMed ID: 15941743
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PreSSAPro: a software for the prediction of secondary structure by amino acid properties.
    Costantini S; Colonna G; Facchiano AM
    Comput Biol Chem; 2007 Oct; 31(5-6):389-92. PubMed ID: 17888742
    [TBL] [Abstract][Full Text] [Related]  

  • 16. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Blast sampling for structural and functional analyses.
    Friedrich A; Ripp R; Garnier N; Bettler E; Deléage G; Poch O; Moulinier L
    BMC Bioinformatics; 2007 Feb; 8():62. PubMed ID: 17319945
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A comprehensive and non-redundant database of protein domain movements.
    Qi G; Lee R; Hayward S
    Bioinformatics; 2005 Jun; 21(12):2832-8. PubMed ID: 15802286
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ADVICE: Automated Detection and Validation of Interaction by Co-Evolution.
    Tan SH; Zhang Z; Ng SK
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W69-72. PubMed ID: 15215353
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DILIMOT: discovery of linear motifs in proteins.
    Neduva V; Russell RB
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W350-5. PubMed ID: 16845024
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.