544 related articles for article (PubMed ID: 15233787)
1. The principle of flux minimization and its application to estimate stationary fluxes in metabolic networks.
Holzhütter HG
Eur J Biochem; 2004 Jul; 271(14):2905-22. PubMed ID: 15233787
[TBL] [Abstract][Full Text] [Related]
2. Computational design of reduced metabolic networks.
Holzhütter S; Holzhütter HG
Chembiochem; 2004 Oct; 5(10):1401-22. PubMed ID: 15457535
[TBL] [Abstract][Full Text] [Related]
3. Composition of metabolic flux distributions by functionally interpretable minimal flux modes (MinModes).
Hoffmann S; Hoppe A; Holzhütter HG
Genome Inform; 2006; 17(1):195-207. PubMed ID: 17503369
[TBL] [Abstract][Full Text] [Related]
4. Quantification of central metabolic fluxes in the facultative methylotroph methylobacterium extorquens AM1 using 13C-label tracing and mass spectrometry.
Van Dien SJ; Strovas T; Lidstrom ME
Biotechnol Bioeng; 2003 Oct; 84(1):45-55. PubMed ID: 12910542
[TBL] [Abstract][Full Text] [Related]
5. The generalized flux-minimization method and its application to metabolic networks affected by enzyme deficiencies.
Holzhütter HG
Biosystems; 2006; 83(2-3):98-107. PubMed ID: 16229937
[TBL] [Abstract][Full Text] [Related]
6. Including metabolite concentrations into flux balance analysis: thermodynamic realizability as a constraint on flux distributions in metabolic networks.
Hoppe A; Hoffmann S; Holzhütter HG
BMC Syst Biol; 2007 Jun; 1():23. PubMed ID: 17543097
[TBL] [Abstract][Full Text] [Related]
7. Towards kinetic modeling of global metabolic networks: Methylobacterium extorquens AM1 growth as validation.
Ao P; Lee LW; Lidstrom ME; Yin L; Zhu X
Sheng Wu Gong Cheng Xue Bao; 2008 Jun; 24(6):980-94. PubMed ID: 18807980
[TBL] [Abstract][Full Text] [Related]
8. Organising metabolic networks: Cycles in flux distributions.
Kritz MV; Trindade Dos Santos M; Urrutia S; Schwartz JM
J Theor Biol; 2010 Aug; 265(3):250-60. PubMed ID: 20435049
[TBL] [Abstract][Full Text] [Related]
9. A hybrid model of anaerobic E. coli GJT001: combination of elementary flux modes and cybernetic variables.
Kim JI; Varner JD; Ramkrishna D
Biotechnol Prog; 2008; 24(5):993-1006. PubMed ID: 19194908
[TBL] [Abstract][Full Text] [Related]
10. Continuous modeling of metabolic networks with gene regulation in yeast and in vivo determination of rate parameters.
Moisset P; Vaisman D; Cintolesi A; Urrutia J; Rapaport I; Andrews BA; Asenjo JA
Biotechnol Bioeng; 2012 Sep; 109(9):2325-39. PubMed ID: 22447363
[TBL] [Abstract][Full Text] [Related]
11. Prediction of metabolic flux distribution from gene expression data based on the flux minimization principle.
Song HS; Reifman J; Wallqvist A
PLoS One; 2014; 9(11):e112524. PubMed ID: 25397773
[TBL] [Abstract][Full Text] [Related]
12. Integrated stoichiometric, thermodynamic and kinetic modelling of steady state metabolism.
Fleming RM; Thiele I; Provan G; Nasheuer HP
J Theor Biol; 2010 Jun; 264(3):683-92. PubMed ID: 20230840
[TBL] [Abstract][Full Text] [Related]
13. CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions.
Desouki AA; Jarre F; Gelius-Dietrich G; Lercher MJ
Bioinformatics; 2015 Jul; 31(13):2159-65. PubMed ID: 25701569
[TBL] [Abstract][Full Text] [Related]
14. The Protein Cost of Metabolic Fluxes: Prediction from Enzymatic Rate Laws and Cost Minimization.
Noor E; Flamholz A; Bar-Even A; Davidi D; Milo R; Liebermeister W
PLoS Comput Biol; 2016 Nov; 12(11):e1005167. PubMed ID: 27812109
[TBL] [Abstract][Full Text] [Related]
15. Genome-scale reconstruction and system level investigation of the metabolic network of Methylobacterium extorquens AM1.
Peyraud R; Schneider K; Kiefer P; Massou S; Vorholt JA; Portais JC
BMC Syst Biol; 2011 Nov; 5():189. PubMed ID: 22074569
[TBL] [Abstract][Full Text] [Related]
16. Application of metabolic flux analysis in metabolic engineering.
Lee SY; Park JM; Kim TY
Methods Enzymol; 2011; 498():67-93. PubMed ID: 21601674
[TBL] [Abstract][Full Text] [Related]
17. Estimating Metabolic Fluxes Using a Maximum Network Flexibility Paradigm.
Megchelenbrink W; Rossell S; Huynen MA; Notebaart RA; Marchiori E
PLoS One; 2015; 10(10):e0139665. PubMed ID: 26457579
[TBL] [Abstract][Full Text] [Related]
18. Thermodynamics-based Metabolite Sensitivity Analysis in metabolic networks.
Kiparissides A; Hatzimanikatis V
Metab Eng; 2017 Jan; 39():117-127. PubMed ID: 27845184
[TBL] [Abstract][Full Text] [Related]
19. Incorporating metabolic flux ratios into constraint-based flux analysis by using artificial metabolites and converging ratio determinants.
Choi HS; Kim TY; Lee DY; Lee SY
J Biotechnol; 2007 May; 129(4):696-705. PubMed ID: 17408794
[TBL] [Abstract][Full Text] [Related]
20. Combining bioinformatics resources for the structural modelling of eukaryotic metabolic networks.
Gille C; Hoffmann S; Holzhütter HG
Genome Inform; 2005; 16(1):223-32. PubMed ID: 16362925
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]