603 related articles for article (PubMed ID: 15262804)
1. Predicting genetic regulatory response using classification.
Middendorf M; Kundaje A; Wiggins C; Freund Y; Leslie C
Bioinformatics; 2004 Aug; 20 Suppl 1():i232-40. PubMed ID: 15262804
[TBL] [Abstract][Full Text] [Related]
2. Regulatory motif finding by logic regression.
Keles S; van der Laan MJ; Vulpe C
Bioinformatics; 2004 Nov; 20(16):2799-811. PubMed ID: 15166027
[TBL] [Abstract][Full Text] [Related]
3. Learning regulatory programs that accurately predict differential expression with MEDUSA.
Kundaje A; Lianoglou S; Li X; Quigley D; Arias M; Wiggins CH; Zhang L; Leslie C
Ann N Y Acad Sci; 2007 Dec; 1115():178-202. PubMed ID: 17934055
[TBL] [Abstract][Full Text] [Related]
4. Computational discovery of transcriptional regulatory rules.
Pham TH; Clemente JC; Satou K; Ho TB
Bioinformatics; 2005 Sep; 21 Suppl 2():ii101-7. PubMed ID: 16204087
[TBL] [Abstract][Full Text] [Related]
5. A graph-based approach to systematically reconstruct human transcriptional regulatory modules.
Yan X; Mehan MR; Huang Y; Waterman MS; Yu PS; Zhou XJ
Bioinformatics; 2007 Jul; 23(13):i577-86. PubMed ID: 17646346
[TBL] [Abstract][Full Text] [Related]
6. A classification-based framework for predicting and analyzing gene regulatory response.
Kundaje A; Middendorf M; Shah M; Wiggins CH; Freund Y; Leslie C
BMC Bioinformatics; 2006 Mar; 7 Suppl 1(Suppl 1):S5. PubMed ID: 16723008
[TBL] [Abstract][Full Text] [Related]
7. Inferring quantitative models of regulatory networks from expression data.
Nachman I; Regev A; Friedman N
Bioinformatics; 2004 Aug; 20 Suppl 1():i248-56. PubMed ID: 15262806
[TBL] [Abstract][Full Text] [Related]
8. An equilibrium partitioning model connecting gene expression and cis-motif content.
Mellor J; DeLisi C
Bioinformatics; 2006 Jul; 22(14):e368-74. PubMed ID: 16873495
[TBL] [Abstract][Full Text] [Related]
9. MotifCut: regulatory motifs finding with maximum density subgraphs.
Fratkin E; Naughton BT; Brutlag DL; Batzoglou S
Bioinformatics; 2006 Jul; 22(14):e150-7. PubMed ID: 16873465
[TBL] [Abstract][Full Text] [Related]
10. Inferring gene regulatory networks from multiple microarray datasets.
Wang Y; Joshi T; Zhang XS; Xu D; Chen L
Bioinformatics; 2006 Oct; 22(19):2413-20. PubMed ID: 16864593
[TBL] [Abstract][Full Text] [Related]
11. Integrating genomic data to predict transcription factor binding.
Holloway DT; Kon M; DeLisi C
Genome Inform; 2005; 16(1):83-94. PubMed ID: 16362910
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.
Kim SY; Kim Y
BMC Bioinformatics; 2006 Jul; 7():330. PubMed ID: 16817975
[TBL] [Abstract][Full Text] [Related]
13. In silico modelling of hormone response elements.
Stepanova M; Lin F; Lin VC
BMC Bioinformatics; 2006 Dec; 7 Suppl 4(Suppl 4):S27. PubMed ID: 17217520
[TBL] [Abstract][Full Text] [Related]
14. Inference of transcriptional regulatory network by two-stage constrained space factor analysis.
Yu T; Li KC
Bioinformatics; 2005 Nov; 21(21):4033-8. PubMed ID: 16144806
[TBL] [Abstract][Full Text] [Related]
15. A cis-regulatory logic simulator.
Zeigler RD; Gertz J; Cohen BA
BMC Bioinformatics; 2007 Jul; 8():272. PubMed ID: 17662143
[TBL] [Abstract][Full Text] [Related]
16. Identification of transcription factor cooperativity via stochastic system model.
Chang YH; Wang YC; Chen BS
Bioinformatics; 2006 Sep; 22(18):2276-82. PubMed ID: 16844711
[TBL] [Abstract][Full Text] [Related]
17. A stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae.
Chen KC; Wang TY; Tseng HH; Huang CY; Kao CY
Bioinformatics; 2005 Jun; 21(12):2883-90. PubMed ID: 15802287
[TBL] [Abstract][Full Text] [Related]
18. A pattern recognition approach to infer time-lagged genetic interactions.
Chuang CL; Jen CH; Chen CM; Shieh GS
Bioinformatics; 2008 May; 24(9):1183-90. PubMed ID: 18337258
[TBL] [Abstract][Full Text] [Related]
19. A Gibbs sampler for the identification of gene expression and network connectivity consistency.
Brynildsen MP; Tran LM; Liao JC
Bioinformatics; 2006 Dec; 22(24):3040-6. PubMed ID: 17060361
[TBL] [Abstract][Full Text] [Related]
20. Statistical methods in integrative analysis for gene regulatory modules.
Zeng L; Wu J; Xie J
Stat Appl Genet Mol Biol; 2008; 7(1):Article 28. PubMed ID: 18976224
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
