587 related articles for article (PubMed ID: 15313608)
1. Energetic diversity of DNA minor-groove recognition by small molecules displayed through some model ligand-DNA systems.
Lah J; Vesnaver G
J Mol Biol; 2004 Sep; 342(1):73-89. PubMed ID: 15313608
[TBL] [Abstract][Full Text] [Related]
2. Circular dichroic and kinetic differentiation of DNA binding modes of distamycin.
Chen FM; Sha F
Biochemistry; 1998 Aug; 37(32):11143-51. PubMed ID: 9698360
[TBL] [Abstract][Full Text] [Related]
3. Binding of netropsin to several DNA constructs: evidence for at least two different 1:1 complexes formed from an -AATT-containing ds-DNA construct and a single minor groove binding ligand.
Freyer MW; Buscaglia R; Cashman D; Hyslop S; Wilson WD; Chaires JB; Lewis EA
Biophys Chem; 2007 Mar; 126(1-3):186-96. PubMed ID: 16837123
[TBL] [Abstract][Full Text] [Related]
4. Binding of distamycin A and netropsin to the 12mer DNA duplexes containing mixed AT.GC sequences with at most five or three successive AT base pairs.
Lah J; Vesnaver G
Biochemistry; 2000 Aug; 39(31):9317-26. PubMed ID: 10924125
[TBL] [Abstract][Full Text] [Related]
5. Molecular dynamics simulations and free energy calculations of netropsin and distamycin binding to an AAAAA DNA binding site.
Dolenc J; Oostenbrink C; Koller J; van Gunsteren WF
Nucleic Acids Res; 2005; 33(2):725-33. PubMed ID: 15687382
[TBL] [Abstract][Full Text] [Related]
6. Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.
Bielawski K; Bielawska A; Bartulewicz D; Rózański A
Acta Biochim Pol; 2000; 47(3):855-66. PubMed ID: 11310985
[TBL] [Abstract][Full Text] [Related]
7. Association of the minor groove binding drug Hoechst 33258 with d(CGCGAATTCGCG)2: volumetric, calorimetric, and spectroscopic characterizations.
Han F; Taulier N; Chalikian TV
Biochemistry; 2005 Jul; 44(28):9785-94. PubMed ID: 16008363
[TBL] [Abstract][Full Text] [Related]
8. The energetics of HMG box interactions with DNA: thermodynamics of the DNA binding of the HMG box from mouse sox-5.
Privalov PL; Jelesarov I; Read CM; Dragan AI; Crane-Robinson C
J Mol Biol; 1999 Dec; 294(4):997-1013. PubMed ID: 10588902
[TBL] [Abstract][Full Text] [Related]
9. Interaction of minor groove ligands to an AAATT/AATTT site: correlation of thermodynamic characterization and solution structure.
Rentzeperis D; Marky LA; Dwyer TJ; Geierstanger BH; Pelton JG; Wemmer DE
Biochemistry; 1995 Mar; 34(9):2937-45. PubMed ID: 7893707
[TBL] [Abstract][Full Text] [Related]
10. Enthalpy/entropy compensation: influence of DNA flanking sequence on the binding of 7-amino actinomycin D to its primary binding site in short DNA duplexes.
Qu X; Ren J; Riccelli PV; Benight AS; Chaires JB
Biochemistry; 2003 Oct; 42(41):11960-7. PubMed ID: 14556627
[TBL] [Abstract][Full Text] [Related]
11. Specific binding of hoechst 33258 to the d(CGCAAATTTGCG)2 duplex: calorimetric and spectroscopic studies.
Haq I; Ladbury JE; Chowdhry BZ; Jenkins TC; Chaires JB
J Mol Biol; 1997 Aug; 271(2):244-57. PubMed ID: 9268656
[TBL] [Abstract][Full Text] [Related]
12. DNA intramolecular triplexes containing dT --> dU substitutions: unfolding energetics and ligand binding.
Soto AM; Rentzeperis D; Shikiya R; Alonso M; Marky LA
Biochemistry; 2006 Mar; 45(9):3051-9. PubMed ID: 16503660
[TBL] [Abstract][Full Text] [Related]
13. Ligands recognizing the minor groove of DNA: development and applications.
Wemmer DE
Biopolymers; 1999-2000; 52(4):197-211. PubMed ID: 11295751
[TBL] [Abstract][Full Text] [Related]
14. Binding affinity and mode of distamycin A with A/T stretches in double-stranded DNA: importance of the terminal A/T residues.
Asagi M; Toyama A; Takeuchi H
Biophys Chem; 2010 Jun; 149(1-2):34-9. PubMed ID: 20395035
[TBL] [Abstract][Full Text] [Related]
15. Solution structure studies of the cobalt complex of a bleomycin functional model bound to d(CGCAATTGCG)2 by two-dimensional nuclear magnetic resonance methods and restrained molecular dynamics simulation.
Yang Y; Huang L; Pon RT; Cheng SF; Chang DK; Lown JW
Bioconjug Chem; 1996; 7(6):670-9. PubMed ID: 8950486
[TBL] [Abstract][Full Text] [Related]
16. Interaction of minor groove ligands with G-quadruplexes: thermodynamic contributions of the number of quartets, T-U substitutions, and conformation.
Prislan I; Khutsishvili I; Marky LA
Biochimie; 2011 Aug; 93(8):1341-50. PubMed ID: 21684318
[TBL] [Abstract][Full Text] [Related]
17. A thermodynamic and structural analysis of DNA minor-groove complex formation.
Mazur S; Tanious FA; Ding D; Kumar A; Boykin DW; Simpson IJ; Neidle S; Wilson WD
J Mol Biol; 2000 Jul; 300(2):321-37. PubMed ID: 10873468
[TBL] [Abstract][Full Text] [Related]
18. [Specific protection of DNA by distamycin A, netropsin and bis-netropsins against the action of DNAse I].
Skamrov AV; Rybalkin IN; Bibilashvili RSh; Gottikh BP; Grokhovskiĭ SL
Mol Biol (Mosk); 1985; 19(1):177-95. PubMed ID: 2984546
[TBL] [Abstract][Full Text] [Related]
19. Carbohydrate-based DNA ligands: sugar-oligoamides as a tool to study carbohydrate-nucleic acid interactions.
Martin JN; Muñoz EM; Schwergold C; Souard F; Asensio JL; Jiménez-Barbero J; Cañada J; Vicent C
J Am Chem Soc; 2005 Jul; 127(26):9518-33. PubMed ID: 15984879
[TBL] [Abstract][Full Text] [Related]
20. DNA conformational effects on the interaction of netropsin with A-tract sequences.
Degtyareva NN; Fresia MJ; Petty JT
Biochemistry; 2007 Dec; 46(51):15136-43. PubMed ID: 18044972
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
