These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

265 related articles for article (PubMed ID: 15333456)

  • 1. SABmark--a benchmark for sequence alignment that covers the entire known fold space.
    Van Walle I; Lasters I; Wyns L
    Bioinformatics; 2005 Apr; 21(7):1267-8. PubMed ID: 15333456
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Protein homology detection using string alignment kernels.
    Saigo H; Vert JP; Ueda N; Akutsu T
    Bioinformatics; 2004 Jul; 20(11):1682-9. PubMed ID: 14988126
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
    Melvin I; Ie E; Kuang R; Weston J; Stafford WN; Leslie C
    BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S2. PubMed ID: 17570145
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Multiple sequence alignment with user-defined constraints at GOBICS.
    Morgenstern B; Werner N; Prohaska SJ; Steinkamp R; Schneider I; Subramanian AR; Stadler PF; Weyer-Menkhoff J
    Bioinformatics; 2005 Apr; 21(7):1271-3. PubMed ID: 15546937
    [TBL] [Abstract][Full Text] [Related]  

  • 5. APDB: a novel measure for benchmarking sequence alignment methods without reference alignments.
    O'Sullivan O; Zehnder M; Higgins D; Bucher P; Grosdidier A; Notredame C
    Bioinformatics; 2003; 19 Suppl 1():i215-21. PubMed ID: 12855461
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SCPRED: accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences.
    Kurgan L; Cios K; Chen K
    BMC Bioinformatics; 2008 May; 9():226. PubMed ID: 18452616
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.
    Pascual-GarcĂ­a A; Abia D; Ortiz AR; Bastolla U
    PLoS Comput Biol; 2009 Mar; 5(3):e1000331. PubMed ID: 19325884
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Predicting fold novelty based on ProtoNet hierarchical classification.
    Kifer I; Sasson O; Linial M
    Bioinformatics; 2005 Apr; 21(7):1020-7. PubMed ID: 15539447
    [TBL] [Abstract][Full Text] [Related]  

  • 9. FORTE: a profile-profile comparison tool for protein fold recognition.
    Tomii K; Akiyama Y
    Bioinformatics; 2004 Mar; 20(4):594-5. PubMed ID: 14764565
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Matt: local flexibility aids protein multiple structure alignment.
    Menke M; Berger B; Cowen L
    PLoS Comput Biol; 2008 Jan; 4(1):e10. PubMed ID: 18193941
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Align-m--a new algorithm for multiple alignment of highly divergent sequences.
    Van Walle I; Lasters I; Wyns L
    Bioinformatics; 2004 Jun; 20(9):1428-35. PubMed ID: 14962914
    [TBL] [Abstract][Full Text] [Related]  

  • 12. BAliBASE 3.0: latest developments of the multiple sequence alignment benchmark.
    Thompson JD; Koehl P; Ripp R; Poch O
    Proteins; 2005 Oct; 61(1):127-36. PubMed ID: 16044462
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ASH structure alignment package: sensitivity and selectivity in domain classification.
    Standley DM; Toh H; Nakamura H
    BMC Bioinformatics; 2007 Apr; 8():116. PubMed ID: 17407606
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MSAT: a multiple sequence alignment tool based on TOPS.
    Ren T; Veeramalai M; Tan AC; Gilbert D
    Appl Bioinformatics; 2004; 3(2-3):149-58. PubMed ID: 15693740
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment.
    Daniels NM; Nadimpalli S; Cowen LJ
    BMC Bioinformatics; 2012 Oct; 13():259. PubMed ID: 23039758
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Prediction of protein structural class for the twilight zone sequences.
    Kurgan L; Chen K
    Biochem Biophys Res Commun; 2007 Jun; 357(2):453-60. PubMed ID: 17433260
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Probabilistic multi-class multi-kernel learning: on protein fold recognition and remote homology detection.
    Damoulas T; Girolami MA
    Bioinformatics; 2008 May; 24(10):1264-70. PubMed ID: 18378524
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Pairwise protein structure alignment based on an orientation-independent backbone representation.
    Ye J; Janardan R; Liu S
    J Bioinform Comput Biol; 2004 Dec; 2(4):699-717. PubMed ID: 15617162
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A new similarity measure among protein sequences.
    Wu KP; Lin HN; Sung TY; Hsu WL
    Proc IEEE Comput Soc Bioinform Conf; 2003; 2():347-52. PubMed ID: 16452810
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Multiple alignment through protein secondary-structure information.
    Armano G; Milanesi L; Orro A
    IEEE Trans Nanobioscience; 2005 Sep; 4(3):207-11. PubMed ID: 16220683
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.