These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

153 related articles for article (PubMed ID: 15359423)

  • 1. Protein classification using comparative molecular interaction profile analysis system.
    Hayashi Y; Kobayashi M; Sakaguchi K; Iwata N; Kobayashi M; Kikuchi Y; Takahashi Y
    J Bioinform Comput Biol; 2004 Sep; 2(3):497-510. PubMed ID: 15359423
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular evaluation using in silico protein interaction profiles.
    Hayashi Y; Sakaguchi K; Kobayashi M; Kobayashi M; Kikuchi Y; Ichiishi E
    Bioinformatics; 2003 Aug; 19(12):1514-23. PubMed ID: 12912832
    [TBL] [Abstract][Full Text] [Related]  

  • 3. FastContact: rapid estimate of contact and binding free energies.
    Camacho CJ; Zhang C
    Bioinformatics; 2005 May; 21(10):2534-6. PubMed ID: 15713734
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimal clustering for detecting near-native conformations in protein docking.
    Kozakov D; Clodfelter KH; Vajda S; Camacho CJ
    Biophys J; 2005 Aug; 89(2):867-75. PubMed ID: 15908573
    [TBL] [Abstract][Full Text] [Related]  

  • 5. BDT: an easy-to-use front-end application for automation of massive docking tasks and complex docking strategies with AutoDock.
    VaquƩ M; Arola A; Aliagas C; Pujadas G
    Bioinformatics; 2006 Jul; 22(14):1803-4. PubMed ID: 16720587
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Flexible ligand docking with Glide.
    Repasky MP; Shelley M; Friesner RA
    Curr Protoc Bioinformatics; 2007 Jun; Chapter 8():Unit 8.12. PubMed ID: 18428795
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Domain-based small molecule binding site annotation.
    Snyder KA; Feldman HJ; Dumontier M; Salama JJ; Hogue CW
    BMC Bioinformatics; 2006 Mar; 7():152. PubMed ID: 16545112
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Predicting protein function from sequence and structural data.
    Watson JD; Laskowski RA; Thornton JM
    Curr Opin Struct Biol; 2005 Jun; 15(3):275-84. PubMed ID: 15963890
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Analyzing molecular interactions.
    Petsko GA
    Curr Protoc Bioinformatics; 2003 May; Chapter 8():Unit8.1. PubMed ID: 18428708
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites.
    Laurie AT; Jackson RM
    Bioinformatics; 2005 May; 21(9):1908-16. PubMed ID: 15701681
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.
    Teyra J; Doms A; Schroeder M; Pisabarro MT
    BMC Bioinformatics; 2006 Mar; 7():104. PubMed ID: 16512892
    [TBL] [Abstract][Full Text] [Related]  

  • 12. FastContact: a free energy scoring tool for protein-protein complex structures.
    Champ PC; Camacho CJ
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W556-60. PubMed ID: 17537824
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Uncovering the structural basis of protein interactions with efficient clustering of 3-D interaction interfaces.
    Aung Z; Tan SH; Ng SK; Tan KL
    Comput Syst Bioinformatics Conf; 2007; 6():287-97. PubMed ID: 17951832
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Real spherical harmonic expansion coefficients as 3D shape descriptors for protein binding pocket and ligand comparisons.
    Morris RJ; Najmanovich RJ; Kahraman A; Thornton JM
    Bioinformatics; 2005 May; 21(10):2347-55. PubMed ID: 15728116
    [TBL] [Abstract][Full Text] [Related]  

  • 15. FSSA: a novel method for identifying functional signatures from structural alignments.
    Wang K; Samudrala R
    Bioinformatics; 2005 Jul; 21(13):2969-77. PubMed ID: 15860561
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Using supervised fuzzy clustering to predict protein structural classes.
    Shen HB; Yang J; Liu XJ; Chou KC
    Biochem Biophys Res Commun; 2005 Aug; 334(2):577-81. PubMed ID: 16023077
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Protein-protein interactions.
    Alexov E
    Curr Pharm Biotechnol; 2008 Apr; 9(2):55-6. PubMed ID: 18393861
    [No Abstract]   [Full Text] [Related]  

  • 18. Protein complexes: structure prediction challenges for the 21st century.
    Aloy P; Pichaud M; Russell RB
    Curr Opin Struct Biol; 2005 Feb; 15(1):15-22. PubMed ID: 15718128
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SHARP2: protein-protein interaction predictions using patch analysis.
    Murakami Y; Jones S
    Bioinformatics; 2006 Jul; 22(14):1794-5. PubMed ID: 16672257
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Predicting 3D structures of protein-protein complexes.
    Vakser IA; Kundrotas P
    Curr Pharm Biotechnol; 2008 Apr; 9(2):57-66. PubMed ID: 18393862
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.