166 related articles for article (PubMed ID: 15369374)
21. Hydration of protein-protein interfaces.
Rodier F; Bahadur RP; Chakrabarti P; Janin J
Proteins; 2005 Jul; 60(1):36-45. PubMed ID: 15856483
[TBL] [Abstract][Full Text] [Related]
22. Thermodynamics of folding and association of lattice-model proteins.
Cellmer T; Bratko D; Prausnitz JM; Blanch H
J Chem Phys; 2005 May; 122(17):174908. PubMed ID: 15910070
[TBL] [Abstract][Full Text] [Related]
23. Identifying folding nucleus based on residue contact networks of proteins.
Li J; Wang J; Wang W
Proteins; 2008 Jun; 71(4):1899-907. PubMed ID: 18175318
[TBL] [Abstract][Full Text] [Related]
24. Influence of Go-like interactions on global shapes of energy landscapes in beta-barrel forming model proteins: inherent structure analysis and statistical temperature molecular dynamics simulation.
Kim J; Keyes T
J Phys Chem B; 2008 Jan; 112(3):954-66. PubMed ID: 18088107
[TBL] [Abstract][Full Text] [Related]
25. Folding pathway dependence on energetic frustration and interaction heterogeneity for a three-dimensional hydrophobic protein model.
Garcia LG; Araújo AF
Proteins; 2006 Jan; 62(1):46-63. PubMed ID: 16292745
[TBL] [Abstract][Full Text] [Related]
26. Looking at structure, stability, and evolution of proteins through the principal eigenvector of contact matrices and hydrophobicity profiles.
Bastolla U; Porto M; Roman HE; Vendruscolo M
Gene; 2005 Mar; 347(2):219-30. PubMed ID: 15777696
[TBL] [Abstract][Full Text] [Related]
27. Carbohydrate-binding proteins: Dissecting ligand structures through solvent environment occupancy.
Gauto DF; Di Lella S; Guardia CM; Estrin DA; Martí MA
J Phys Chem B; 2009 Jun; 113(25):8717-24. PubMed ID: 19485380
[TBL] [Abstract][Full Text] [Related]
28. Direct observation of salt effects on molecular interactions through explicit-solvent molecular dynamics simulations: differential effects on electrostatic and hydrophobic interactions and comparisons to Poisson-Boltzmann theory.
Thomas AS; Elcock AH
J Am Chem Soc; 2006 Jun; 128(24):7796-806. PubMed ID: 16771493
[TBL] [Abstract][Full Text] [Related]
29. Leading RNA tertiary interactions: structures, energies, and water insertion of A-minor and P-interactions. A quantum chemical view.
Sponer JE; Réblova K; Mokdad A; Sychrovský V; Leszczynski J; Sponer J
J Phys Chem B; 2007 Aug; 111(30):9153-64. PubMed ID: 17602515
[TBL] [Abstract][Full Text] [Related]
30. The experimental survey of protein-folding energy landscapes.
Oliveberg M; Wolynes PG
Q Rev Biophys; 2005 Aug; 38(3):245-88. PubMed ID: 16780604
[TBL] [Abstract][Full Text] [Related]
31. Another look at the conditions for the extraction of protein knowledge-based potentials.
Betancourt MR
Proteins; 2009 Jul; 76(1):72-85. PubMed ID: 19089977
[TBL] [Abstract][Full Text] [Related]
32. Free energy landscape of a biomolecule in dihedral principal component space: sampling convergence and correspondence between structures and minima.
Maisuradze GG; Leitner DM
Proteins; 2007 May; 67(3):569-78. PubMed ID: 17348026
[TBL] [Abstract][Full Text] [Related]
33. Stability constraints and protein evolution: the role of chain length, composition and disulfide bonds.
Bastolla U; Demetrius L
Protein Eng Des Sel; 2005 Sep; 18(9):405-15. PubMed ID: 16085657
[TBL] [Abstract][Full Text] [Related]
34. Enthalpy-entropy contributions to salt and osmolyte effects on molecular-scale hydrophobic hydration and interactions.
Athawale MV; Sarupria S; Garde S
J Phys Chem B; 2008 May; 112(18):5661-70. PubMed ID: 18447346
[TBL] [Abstract][Full Text] [Related]
35. Characterization of interfacial solvent in protein complexes and contribution of wet spots to the interface description.
Teyra J; Pisabarro MT
Proteins; 2007 Jun; 67(4):1087-95. PubMed ID: 17397062
[TBL] [Abstract][Full Text] [Related]
36. A simple Calpha-SC potential with higher accuracy for protein fold recognition.
Gu J; Li H; Jiang H; Wang X
Biochem Biophys Res Commun; 2009 Feb; 379(2):610-5. PubMed ID: 19121621
[TBL] [Abstract][Full Text] [Related]
37. Insights into activation and RNA binding of trp RNA-binding attenuation protein (TRAP) through all-atom simulations.
Murtola T; Vattulainen I; Falck E
Proteins; 2008 Jun; 71(4):1995-2011. PubMed ID: 18186477
[TBL] [Abstract][Full Text] [Related]
38. Specificity of molecular interactions in transient protein-protein interaction interfaces.
Cho KI; Lee K; Lee KH; Kim D; Lee D
Proteins; 2006 Nov; 65(3):593-606. PubMed ID: 16948160
[TBL] [Abstract][Full Text] [Related]
39. Molecular principles of the interactions of disordered proteins.
Mészáros B; Tompa P; Simon I; Dosztányi Z
J Mol Biol; 2007 Sep; 372(2):549-61. PubMed ID: 17681540
[TBL] [Abstract][Full Text] [Related]
40. Interaction of Alzheimer's A beta peptide with an engineered binding protein--thermodynamics and kinetics of coupled folding-binding.
Hoyer W; Härd T
J Mol Biol; 2008 Apr; 378(2):398-411. PubMed ID: 18358490
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]