These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

87 related articles for article (PubMed ID: 15459287)

  • 1. Adjust quality scores from alignment and improve sequencing accuracy.
    Li M; Nordborg M; Li LM
    Nucleic Acids Res; 2004; 32(17):5183-91. PubMed ID: 15459287
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The effect of sequence quality on sequence alignment.
    Malde K
    Bioinformatics; 2008 Apr; 24(7):897-900. PubMed ID: 18296747
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Effects of sample re-sequencing and trimming on the quality and size of assembled consensus sequences.
    Prosdocimi F; Lopes DA; Peixoto FC; Mourão MM; Pacífico LG; Ribeiro RA; Ortega JM
    Genet Mol Res; 2007 Oct; 6(4):756-65. PubMed ID: 18058703
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Optimal spliced alignments of short sequence reads.
    De Bona F; Ossowski S; Schneeberger K; Rätsch G
    Bioinformatics; 2008 Aug; 24(16):i174-80. PubMed ID: 18689821
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PhredEM: a phred-score-informed genotype-calling approach for next-generation sequencing studies.
    Liao P; Satten GA; Hu YJ
    Genet Epidemiol; 2017 Jul; 41(5):375-387. PubMed ID: 28560825
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Evaluation of window cohabitation of DNA sequencing errors and lowest PHRED quality values.
    Prosdocimi F; Peixoto FC; Ortega JM
    Genet Mol Res; 2004 Dec; 3(4):483-92. PubMed ID: 15688315
    [TBL] [Abstract][Full Text] [Related]  

  • 7. preAssemble: a tool for automatic sequencer trace data processing.
    Adzhubei AA; Laerdahl JK; Vlasova AV
    BMC Bioinformatics; 2006 Jan; 7():22. PubMed ID: 16417643
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.
    Di X; Matsuzaki H; Webster TA; Hubbell E; Liu G; Dong S; Bartell D; Huang J; Chiles R; Yang G; Shen MM; Kulp D; Kennedy GC; Mei R; Jones KW; Cawley S
    Bioinformatics; 2005 May; 21(9):1958-63. PubMed ID: 15657097
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Refinement of optical map assemblies.
    Valouev A; Zhang Y; Schwartz DC; Waterman MS
    Bioinformatics; 2006 May; 22(10):1217-24. PubMed ID: 16500933
    [TBL] [Abstract][Full Text] [Related]  

  • 10. HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
    Bansal V; Bafna V
    Bioinformatics; 2008 Aug; 24(16):i153-9. PubMed ID: 18689818
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Primer design for automated DNA sequencing in a core facility.
    O'Shaughnessy JB; Chan M; Clark K; Ivanetich KM
    Biotechniques; 2003 Jul; 35(1):112-6, 118-21. PubMed ID: 12866412
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improvement of base-calling in multilane automated DNA sequencing by use of electrophoretic calibration standards, data linearization, and trace alignment.
    Izmailov A; Yager TD; Zaleski H; Darash S
    Electrophoresis; 2001 Jun; 22(10):1906-14. PubMed ID: 11465487
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Robust prediction of consensus secondary structures using averaged base pairing probability matrices.
    Kiryu H; Kin T; Asai K
    Bioinformatics; 2007 Feb; 23(4):434-41. PubMed ID: 17182698
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DNA sequence confidence estimation.
    Lipshutz RJ; Taverner F; Hennessy K; Hartzell G; Davis R
    Genomics; 1994 Feb; 19(3):417-24. PubMed ID: 8188283
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Finding the biologically optimal alignment of multiple sequences.
    Mamitsuka H
    Artif Intell Med; 2005; 35(1-2):9-18. PubMed ID: 16051477
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A segmentation/clustering model for the analysis of array CGH data.
    Picard F; Robin S; Lebarbier E; Daudin JJ
    Biometrics; 2007 Sep; 63(3):758-66. PubMed ID: 17825008
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A profile-based deterministic sequential Monte Carlo algorithm for motif discovery.
    Liang KC; Wang X; Anastassiou D
    Bioinformatics; 2008 Jan; 24(1):46-55. PubMed ID: 18024972
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PoooL: an efficient method for estimating haplotype frequencies from large DNA pools.
    Zhang H; Yang HC; Yang Y
    Bioinformatics; 2008 Sep; 24(17):1942-8. PubMed ID: 18573795
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Bias in error estimation when using cross-validation for model selection.
    Varma S; Simon R
    BMC Bioinformatics; 2006 Feb; 7():91. PubMed ID: 16504092
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Assign 2.0: software for the analysis of Phred quality values for quality control of HLA sequencing-based typing.
    Sayer DC; Goodridge DM; Christiansen FT
    Tissue Antigens; 2004 Nov; 64(5):556-65. PubMed ID: 15496198
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.