108 related articles for article (PubMed ID: 15498558)
1. A novel method of analyzing proline synonymous codons in E. coli.
Wang ML; Song JN; Xu WB; Li WJ
FEBS Lett; 2004 Oct; 576(3):336-8. PubMed ID: 15498558
[TBL] [Abstract][Full Text] [Related]
2. Exploring synonymous codon usage preferences of disulfide-bonded and non-disulfide bonded cysteines in the E. coli genome.
Song J; Wang M; Burrage K
J Theor Biol; 2006 Jul; 241(2):390-401. PubMed ID: 16427089
[TBL] [Abstract][Full Text] [Related]
3. Studies on the relationships between the synonymous codon usage and protein secondary structural units.
Gupta SK; Majumdar S; Bhattacharya TK; Ghosh TC
Biochem Biophys Res Commun; 2000 Mar; 269(3):692-6. PubMed ID: 10720478
[TBL] [Abstract][Full Text] [Related]
4. ISSCOR: Intragenic, Stochastic Synonymous Codon Occurrence Replacement--a new method for an alignment-free genome sequence analysis.
Radomski JP; Slonimski PP
C R Biol; 2009 Apr; 332(4):336-50. PubMed ID: 19304264
[TBL] [Abstract][Full Text] [Related]
5. Studies on synonymous codon and amino acid usages in Aeromonas hydrophila phage Aeh1: architecture of protein-coding genes and therapeutic implications.
Sau K
J Microbiol Immunol Infect; 2007 Feb; 40(1):24-33. PubMed ID: 17332903
[TBL] [Abstract][Full Text] [Related]
6. The relationship between synonymous codon usage and protein structure in Escherichia coli and Homo sapiens.
Gu W; Zhou T; Ma J; Sun X; Lu Z
Biosystems; 2004 Feb; 73(2):89-97. PubMed ID: 15013221
[TBL] [Abstract][Full Text] [Related]
7. Synonymous codon usage in Escherichia coli: selection for translational accuracy.
Stoletzki N; Eyre-Walker A
Mol Biol Evol; 2007 Feb; 24(2):374-81. PubMed ID: 17101719
[TBL] [Abstract][Full Text] [Related]
8. Error minimization explains the codon usage of highly expressed genes in Escherichia coli.
Najafabadi HS; Lehmann J; Omidi M
Gene; 2007 Jan; 387(1-2):150-5. PubMed ID: 17097242
[TBL] [Abstract][Full Text] [Related]
9. Correlation of codon bias measures with mRNA levels: analysis of transcriptome data from Escherichia coli.
Goetz RM; Fuglsang A
Biochem Biophys Res Commun; 2005 Feb; 327(1):4-7. PubMed ID: 15629421
[TBL] [Abstract][Full Text] [Related]
10. The factors shaping synonymous codon usage in the genome of Burkholderia mallei.
Zhao S; Zhang Q; Chen Z; Zhao Y; Zhong J
J Genet Genomics; 2007 Apr; 34(4):362-72. PubMed ID: 17498635
[TBL] [Abstract][Full Text] [Related]
11. Factors influencing synonymous codon and amino acid usage biases in Mimivirus.
Sau K; Gupta SK; Sau S; Mandal SC; Ghosh TC
Biosystems; 2006 Aug; 85(2):107-13. PubMed ID: 16442213
[TBL] [Abstract][Full Text] [Related]
12. The relation between codon usage, base correlation and gene expression level in Escherichia coli and yeast.
Li H; Luo L
J Theor Biol; 1996 Jul; 181(2):111-24. PubMed ID: 8935590
[TBL] [Abstract][Full Text] [Related]
13. Conformational preferences of proline oligopeptides.
Kang YK; Jhon JS; Park HS
J Phys Chem B; 2006 Sep; 110(35):17645-55. PubMed ID: 16942110
[TBL] [Abstract][Full Text] [Related]
14. Experimental confirmation of a key role for non-optimal codons in protein export.
Zalucki YM; Jennings MP
Biochem Biophys Res Commun; 2007 Mar; 355(1):143-8. PubMed ID: 17291454
[TBL] [Abstract][Full Text] [Related]
15. The 'weighted sum of relative entropy': a new index for synonymous codon usage bias.
Suzuki H; Saito R; Tomita M
Gene; 2004 Jun; 335():19-23. PubMed ID: 15194186
[TBL] [Abstract][Full Text] [Related]
16. Predicting synonymous codon usage and optimizing the heterologous gene for expression in E. coli.
Tian J; Yan Y; Yue Q; Liu X; Chu X; Wu N; Fan Y
Sci Rep; 2017 Aug; 7(1):9926. PubMed ID: 28855614
[TBL] [Abstract][Full Text] [Related]
17. Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts.
Nakamura M; Sugiura M
Plant J; 2007 Jan; 49(1):128-34. PubMed ID: 17144890
[TBL] [Abstract][Full Text] [Related]
18. Biased codon usage in signal peptides: a role in protein export.
Zalucki YM; Beacham IR; Jennings MP
Trends Microbiol; 2009 Apr; 17(4):146-50. PubMed ID: 19307122
[TBL] [Abstract][Full Text] [Related]
19. Genetic robustness and selection at the protein level for synonymous codons.
Archetti M
J Evol Biol; 2006 Mar; 19(2):353-65. PubMed ID: 16599911
[TBL] [Abstract][Full Text] [Related]
20. Rare codon clusters at 5'-end influence heterologous expression of archaeal gene in Escherichia coli.
Kim S; Lee SB
Protein Expr Purif; 2006 Nov; 50(1):49-57. PubMed ID: 16962338
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
