These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
413 related articles for article (PubMed ID: 15527510)
1. ESTIMA, a tool for EST management in a multi-project environment. Kumar CG; LeDuc R; Gong G; Roinishivili L; Lewin HA; Liu L BMC Bioinformatics; 2004 Nov; 5():176. PubMed ID: 15527510 [TBL] [Abstract][Full Text] [Related]
2. JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow. Latorre M; Silva H; Saba J; Guziolowski C; Vizoso P; Martinez V; Maldonado J; Morales A; Caroca R; Cambiazo V; Campos-Vargas R; Gonzalez M; Orellana A; Retamales J; Meisel LA BMC Bioinformatics; 2006 Nov; 7():513. PubMed ID: 17123449 [TBL] [Abstract][Full Text] [Related]
3. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W; Wang X; Porter TE; Nys Y; Tang J; Bernberg E; Morgan R; Burnside J; Aggrey SE; Simon J; Cogburn LA Physiol Genomics; 2006 May; 25(3):514-24. PubMed ID: 16554550 [TBL] [Abstract][Full Text] [Related]
5. ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform. Nagaraj SH; Deshpande N; Gasser RB; Ranganathan S Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W143-7. PubMed ID: 17545197 [TBL] [Abstract][Full Text] [Related]
6. EST processing: from trace to sequence. Schmid R; Blaxter M Methods Mol Biol; 2009; 533():189-220. PubMed ID: 19277557 [TBL] [Abstract][Full Text] [Related]
7. ESTuber db: an online database for Tuber borchii EST sequences. Lazzari B; Caprera A; Cosentino C; Stella A; Milanesi L; Viotti A BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S13. PubMed ID: 17430557 [TBL] [Abstract][Full Text] [Related]
8. EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration. Forment J; Gilabert F; Robles A; Conejero V; Nuez F; Blanca JM BMC Bioinformatics; 2008 Jan; 9():5. PubMed ID: 18179701 [TBL] [Abstract][Full Text] [Related]
9. The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. Lee Y; Tsai J; Sunkara S; Karamycheva S; Pertea G; Sultana R; Antonescu V; Chan A; Cheung F; Quackenbush J Nucleic Acids Res; 2005 Jan; 33(Database issue):D71-4. PubMed ID: 15608288 [TBL] [Abstract][Full Text] [Related]
10. OrchidBase: a collection of sequences of the transcriptome derived from orchids. Fu CH; Chen YW; Hsiao YY; Pan ZJ; Liu ZJ; Huang YM; Tsai WC; Chen HH Plant Cell Physiol; 2011 Feb; 52(2):238-43. PubMed ID: 21245031 [TBL] [Abstract][Full Text] [Related]
11. ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs). Liang C; Wang G; Liu L; Ji G; Fang L; Liu Y; Carter K; Webb JS; Dean JF BMC Genomics; 2007 May; 8():134. PubMed ID: 17535431 [TBL] [Abstract][Full Text] [Related]
12. Plant Gene and Alternatively Spliced Variant Annotator. A plant genome annotation pipeline for rice gene and alternatively spliced variant identification with cross-species expressed sequence tag conservation from seven plant species. Chen FC; Wang SS; Chaw SM; Huang YT; Chuang TJ Plant Physiol; 2007 Mar; 143(3):1086-95. PubMed ID: 17220363 [TBL] [Abstract][Full Text] [Related]
13. A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis). Ralph SG; Chun HJ; Kolosova N; Cooper D; Oddy C; Ritland CE; Kirkpatrick R; Moore R; Barber S; Holt RA; Jones SJ; Marra MA; Douglas CJ; Ritland K; Bohlmann J BMC Genomics; 2008 Oct; 9():484. PubMed ID: 18854048 [TBL] [Abstract][Full Text] [Related]
14. A hitchhiker's guide to expressed sequence tag (EST) analysis. Nagaraj SH; Gasser RB; Ranganathan S Brief Bioinform; 2007 Jan; 8(1):6-21. PubMed ID: 16772268 [TBL] [Abstract][Full Text] [Related]
15. Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries. Keime C; Damiola F; Mouchiroud D; Duret L; Gandrillon O BMC Bioinformatics; 2004 Oct; 5():143. PubMed ID: 15469608 [TBL] [Abstract][Full Text] [Related]
16. Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome. Kim HJ; Baek KH; Lee SW; Kim J; Lee BW; Cho HS; Kim WT; Choi D; Hur CG BMC Plant Biol; 2008 Oct; 8():101. PubMed ID: 18844979 [TBL] [Abstract][Full Text] [Related]
17. ESAP plus: a web-based server for EST-SSR marker development. Ponyared P; Ponsawat J; Tongsima S; Seresangtakul P; Akkasaeng C; Tantisuwichwong N BMC Genomics; 2016 Dec; 17(Suppl 13):1035. PubMed ID: 28155670 [TBL] [Abstract][Full Text] [Related]
18. PESTAS: a web server for EST analysis and sequence mining. Nam SH; Kim DW; Jung TS; Choi YS; Kim DW; Choi HS; Choi SH; Park HS Bioinformatics; 2009 Jul; 25(14):1846-8. PubMed ID: 19414531 [TBL] [Abstract][Full Text] [Related]